Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.6e-148 529.3 249 100.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 6.7e-126 454.1 245 83.7
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.3e-125 451.8 243 85.2
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 5.7e-125 451.1 245 82.9
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 9.7e-125 450.3 248 82.7
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.8e-124 448.7 249 81.1
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 6.3e-124 447.6 245 82.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.8e-123 446.0 244 82.4
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.8e-123 446.0 245 82.4
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.4e-123 445.7 245 83.3
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 4.1e-123 444.9 245 80.4
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 4.1e-123 444.9 245 81.6
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 9.1e-123 443.7 248 80.6
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 9.1e-123 443.7 248 80.6
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.2e-122 443.4 246 81.7
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.6e-122 443.0 245 80.8
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.6e-122 443.0 248 81.9
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.6e-122 443.0 245 80.8
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.7e-122 442.2 247 80.6
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 3.5e-122 441.8 253 80.2
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 3.5e-122 441.8 245 80.8
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.5e-122 441.8 247 81.8
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.5e-122 441.4 246 80.1
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.5e-122 441.4 245 80.8
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.9e-122 441.0 243 81.1
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 5.9e-122 441.0 248 81.0
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 5.9e-122 441.0 245 82.4
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.7e-122 440.7 243 81.1
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 7.7e-122 440.7 245 80.8
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.3e-121 439.9 244 81.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.3e-121 439.9 245 80.8
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.3e-121 439.9 245 81.6
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.3e-121 439.9 245 81.2
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.3e-121 439.9 217 92.2
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 2.2e-121 439.1 245 78.8
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.9e-121 438.7 243 80.7
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.9e-121 438.7 243 81.1
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.8e-121 438.3 245 81.6
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.8e-121 438.3 245 80.4
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 5.0e-121 438.0 245 80.4
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 6.5e-121 437.6 248 79.8
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.1e-120 436.8 245 80.8
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-120 436.8 249 79.5
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.9e-120 436.0 245 80.0
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.5e-120 435.6 251 79.3
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.5e-120 435.6 243 80.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.5e-120 435.6 248 79.8
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.5e-120 435.6 243 80.7
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.5e-120 435.6 245 80.4
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.5e-120 435.6 243 80.2
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.5e-120 435.6 245 80.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.2e-120 435.3 248 79.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 5.5e-120 434.5 248 79.8
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 5.5e-120 434.5 245 79.6
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 5.5e-120 434.5 249 78.3
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 7.2e-120 434.1 244 81.1
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 7.2e-120 434.1 245 80.0
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 7.2e-120 434.1 243 80.2
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 9.4e-120 433.7 244 79.9
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.2e-119 433.3 244 81.1
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.2e-119 433.3 248 78.6
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.1e-119 432.6 244 81.1
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.1e-119 432.6 245 80.0
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 3.6e-119 431.8 245 80.0
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 3.6e-119 431.8 245 80.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 8.0e-119 430.6 248 79.0
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.0e-118 430.3 245 79.6
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.0e-118 430.3 245 80.0
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.3e-118 429.1 245 80.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.3e-118 429.1 270 74.1
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 3.0e-118 428.7 249 79.1
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 8.8e-118 427.2 246 80.1
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.5e-117 426.4 244 78.7
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 7.5e-117 424.1 243 78.2
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 3.7e-116 421.8 244 78.7
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 3.7e-116 421.8 244 78.7
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.1e-115 420.2 245 78.0
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.1e-115 420.2 245 78.0
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.8e-115 419.5 244 78.3
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.4e-115 419.1 246 78.5
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.0e-114 416.0 251 74.5
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.7e-113 412.9 246 75.6
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.5e-112 409.8 245 77.6
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 9.5e-112 407.1 244 75.0
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.2e-111 406.8 252 75.4
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.6e-111 406.4 249 76.3
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.8e-108 395.6 252 73.8
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.8e-108 395.6 243 73.3
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.4e-107 393.3 248 70.2
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.4e-107 393.3 217 80.6
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.3e-105 386.7 282 67.0
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 8.6e-105 384.0 243 67.9
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.9e-104 382.9 213 79.3
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 3.3e-104 382.1 245 73.1
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 5.6e-104 381.3 248 68.5
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 7.3e-96 354.4 246 64.6
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.7e-95 351.7 243 67.9
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 6.8e-94 347.8 450 43.3
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.5e-88 327.4 222 70.3
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 5.4e-75 285.0 246 56.5
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 6.4e-68 261.5 161 76.4
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 7.8e-66 254.6 161 73.9
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 5.1e-65 251.9 283 43.1
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.7e-60 236.9 242 47.1
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.8e-60 235.7 241 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.6e-58 230.3 277 41.2
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 7.9e-58 228.0 120 84.2
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.1e-46 189.5 204 49.0
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 6.5e-44 181.8 285 38.2
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.3e-36 157.5 81 85.2
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.9e-36 156.4 91 72.5
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 4.8e-31 139.0 124 59.7
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 8.2e-31 138.3 133 48.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.9e-28 129.8 79 70.9
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 8.2e-23 111.7 53 92.5
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 4.1e-22 109.4 69 66.7
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.2e-15 85.1 84 46.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 5.5e-11 72.4 74 54.1
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.2e-10 71.2 39 71.8


User provided reference genes

Program Settings