Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 9.5e-264 912.9 446 100.0
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 9.9e-128 461.1 420 63.1
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.5e-112 409.1 458 54.8
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.8e-82 309.3 462 43.7
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.5e-78 297.0 452 43.8
Os05g0250200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.6e-77 294.3 441 42.6
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.5e-72 276.6 462 40.9
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.2e-66 257.3 460 39.6
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.7e-66 256.5 424 40.1
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 7.0e-41 172.6 179 51.4
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.5e-22 111.7 363 28.7
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 8.4e-18 95.9 306 30.1
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 9.6e-14 82.4 181 29.3
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.1e-13 81.3 210 28.6
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 2.4e-12 77.8 197 26.9
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.1e-12 77.4 196 30.6
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 3.1e-12 77.4 174 31.6
Zm00001eb083100 Zea mays HOM05D009075 ORTHO05D011069 6.8e-12 76.3 203 29.6
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 8.9e-12 75.9 207 28.5
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 2.0e-11 74.7 174 28.7
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 5.8e-11 73.2 398 25.4
Zm00001eb284060 Zea mays HOM05D009075 ORTHO05D011069 3.8e-10 70.5 194 30.4
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 6.4e-10 69.7 224 28.1
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.1e-09 68.9 241 26.6
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 1.4e-09 68.6 190 28.9
Os01g0244150 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.2e-09 67.4 165 27.3
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.1e-09 66.2 141 26.2
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 7.1e-09 66.2 169 27.8
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 9.3e-09 65.9 213 26.3
PGSC0003DMG400025009 Solanum tuberosum HOM05D008898 ORTHO05D001155 9.3e-09 65.9 243 28.4
CAN.G1110.53 Capsicum annuum HOM05D001729 ORTHO05D001155 1.2e-08 65.5 227 30.0
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.2e-08 65.5 133 28.6
SGA_v2.0_scaffold1G00761 Striga asiatica HOM05D001729 ORTHO05D001155 1.6e-08 65.1 298 23.8
EL10Ac1g01661 Beta vulgaris HOM05D001340 ORTHO05D005342 3.5e-08 63.9 247 24.3
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.0e-08 63.2 116 35.3
Sopen10g002860 Solanum pennellii HOM05D008898 ORTHO05D001155 6.0e-08 63.2 264 28.0
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 7.8e-08 62.8 210 24.8


User provided reference genes

Program Settings