Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.7e-277 958.0 473 100.0
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.0e-127 461.1 420 63.1
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.2e-92 342.8 417 52.0
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.4e-70 270.0 421 43.0
Os05g0250200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.3e-66 258.1 401 42.9
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.1e-66 256.1 418 41.6
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 9.0e-63 245.4 413 40.0
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.6e-62 243.8 420 41.0
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.0e-61 241.9 426 39.7
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 5.0e-37 159.8 177 50.3
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.5e-20 104.4 428 27.1
Hund23304 Selenicereus undatus HOM05D009075 ORTHO05D011069 4.2e-20 103.6 402 26.9
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.2e-11 75.5 413 24.2
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.7e-11 73.6 142 32.4
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.1e-11 73.2 345 25.2
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 1.0e-10 72.4 363 25.3
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.0e-10 70.5 290 29.0
EL10Ac1g01661 Beta vulgaris HOM05D001340 ORTHO05D005342 6.8e-10 69.7 299 24.7
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 6.8e-10 69.7 363 25.1
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.5e-09 68.6 382 25.7
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 3.4e-09 67.4 237 23.2
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.9e-08 63.5 199 23.1
Os01g0240600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.4e-08 63.2 300 26.0
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 8.3e-08 62.8 178 25.8
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 1.4e-07 62.0 174 29.3
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.9e-07 61.6 99 37.4
Os06g0161400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D301815 1.9e-07 61.6 409 24.9
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.4e-07 61.2 170 23.5
Zm00001eb083100 Zea mays HOM05D009075 ORTHO05D011069 2.4e-07 61.2 177 26.0
CAN.G1110.53 Capsicum annuum HOM05D001729 ORTHO05D001155 5.4e-07 60.1 173 30.1
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.6e-06 57.0 170 23.5
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 4.6e-06 57.0 181 28.2


User provided reference genes

Program Settings