Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0179100 Oryza sativa ssp. japonica HOM05D008584 ORTHO05D010813 2.7e-43 178.3 95 100.0
Zm00001eb282970 Zea mays HOM05D008584 ORTHO05D010813 1.3e-16 89.7 95 61.1
Cc06_g09330 Coffea canephora HOM05D008584 ORTHO05D010813 1.2e-09 66.6 59 55.9
CANSAT56G1052 Cannabis sativa HOM05D008584 ORTHO05D010813 2.6e-09 65.5 60 56.7
HPP92_000677 Vanilla planifolia HOM05D008584 ORTHO05D010813 1.7e-08 62.8 53 64.2
AL9U10260 Arabidopsis lyrata HOM05D008584 ORTHO05D010813 2.2e-08 62.4 34 79.4
C08p08150 Brassica napus HOM05D008584 ORTHO05D010813 2.2e-08 62.4 49 59.2
BolC8t47667H Brassica oleracea HOM05D008584 ORTHO05D010813 2.2e-08 62.4 49 59.2
CsaV3_2G002450 Cucumis sativus L. HOM05D008584 ORTHO05D010813 2.8e-08 62.0 52 51.9
A08p06820 Brassica napus HOM05D008584 ORTHO05D010813 4.9e-08 61.2 50 60.0
BraA08t32700Z Brassica rapa HOM05D008584 ORTHO05D010813 4.9e-08 61.2 50 60.0
AT4G13395 Arabidopsis thaliana HOM05D008584 ORTHO05D010813 8.3e-08 60.5 51 62.7
CARHR218960 Cardamine hirsuta HOM05D008584 ORTHO05D010813 1.1e-07 60.1 50 58.0
ClCG11G002630 Citrullus lanatus HOM05D008584 ORTHO05D010813 1.4e-07 59.7 57 50.9
Gohir.D07G004000 Gossypium hirsutum HOM05D008584 ORTHO05D010813 1.4e-07 59.7 53 54.7
Os01g0178850 Oryza sativa ssp. japonica HOM05D008584 ORTHO05D010813 1.4e-07 59.7 86 41.9
Phvul.011G012500 Phaseolus vulgaris HOM05D008584 ORTHO05D010813 1.4e-07 59.7 41 58.5
AagrBONN_evm.TU.Sc2ySwM_368.1140 Anthoceros agrestis HOM05D008584 ORTHO05D010813 2.4e-07 58.9 55 49.1
Prupe.7G227100 Prunus persica HOM05D008584 ORTHO05D010813 2.4e-07 58.9 45 55.6
Carub.0007s2917 Capsella rubella HOM05D008584 ORTHO05D010813 3.1e-07 58.5 52 57.7
MD02G1062300 Malus domestica HOM05D008584 ORTHO05D010813 3.1e-07 58.5 45 57.8
Duzib168G0012 Durio zibethinus HOM05D008584 ORTHO05D010813 4.1e-07 58.2 60 53.3
FAN28G0880 Fragaria x ananassa HOM05D008584 ORTHO05D010813 5.4e-07 57.8 52 51.9
Nn2g11826 Nelumbo nucifera HOM05D008584 ORTHO05D010813 7.0e-07 57.4 53 52.8
Thecc.09G114800 Theobroma cacao HOM05D008584 ORTHO05D010813 7.0e-07 57.4 61 47.5
vmacro22125 Vaccinium macrocarpon HOM05D008584 ORTHO05D010813 7.0e-07 57.4 68 50.0
CiPaw.04G167100 Carya illinoinensis HOM05D008584 ORTHO05D010813 9.2e-07 57.0 49 53.1
Potri.018G072101 Populus trichocarpa HOM05D008584 ORTHO05D010813 1.2e-06 56.6 60 51.7
CSS0042146 Camellia sinensis var. sinensis HOM05D008584 ORTHO05D010813 2.0e-06 55.8 59 44.1
Gohir.A05G021200 Gossypium hirsutum HOM05D008584 ORTHO05D010813 3.5e-06 55.1 54 53.7
Gohir.D05G022600 Gossypium hirsutum HOM05D008584 ORTHO05D010813 3.5e-06 55.1 54 53.7
Nn2g15804 Nelumbo nucifera HOM05D008584 ORTHO05D010813 3.5e-06 55.1 37 64.9
Nn2g15810 Nelumbo nucifera HOM05D008584 ORTHO05D010813 3.5e-06 55.1 37 64.9
Manes.03G068566 Manihot esculenta HOM05D008584 ORTHO05D010813 4.5e-06 54.7 50 48.0
RcHm_v2.0_Chr2g0091061 Rosa chinensis HOM05D008584 ORTHO05D010813 4.5e-06 54.7 61 49.2
Manes.03G068582 Manihot esculenta HOM05D008584 ORTHO05D010813 7.8e-06 53.9 51 45.1


User provided reference genes

Program Settings