Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0147150 Oryza sativa ssp. japonica HOM05D005257 ORTHO05D006425 4.2e-94 348.2 199 100.0
Nn1g06286 Nelumbo nucifera HOM05D005257 ORTHO05D006425 1.2e-13 80.9 225 36.4
CDE10G0660 Ceratophyllum demersum HOM05D005257 ORTHO05D006425 2.8e-13 79.7 216 38.0
PSO339G0351 Papaver somniferum HOM05D005257 ORTHO05D006425 4.7e-13 79.0 170 44.7
PSO384G0627 Papaver somniferum HOM05D005257 ORTHO05D006425 1.1e-12 77.8 187 41.7
TAR362G1082 Trochodendron aralioides HOM05D005257 ORTHO05D006425 9.8e-11 71.2 166 40.4
BolC2t06856H Brassica oleracea HOM05D005257 ORTHO05D006425 3.7e-10 69.3 156 37.2
COL.COLO4_28604 Corchorus olitorius HOM05D005257 ORTHO05D006425 6.4e-10 68.6 140 42.9
ATR0697G033 Amborella trichopoda HOM05D005257 ORTHO05D006425 1.4e-09 67.4 174 36.2
A02p04570 Brassica napus HOM05D005257 ORTHO05D006425 1.4e-09 67.4 157 38.9
BraA02t05418Z Brassica rapa HOM05D005257 ORTHO05D006425 1.4e-09 67.4 157 38.9
Aa31LG11G11610 Aethionema arabicum HOM05D005257 ORTHO05D006425 5.4e-09 65.5 142 39.4
Dinv11935 Davidia involucrata HOM05D005257 ORTHO05D006425 5.4e-09 65.5 152 40.1
AL6G29030 Arabidopsis lyrata HOM05D005257 ORTHO05D006425 7.0e-09 65.1 194 34.5
Eucgr.A02125 Eucalyptus grandis HOM05D005257 ORTHO05D006425 7.0e-09 65.1 161 35.4
MBI05_g42570_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 7.0e-09 65.1 63 58.7
THA.LOC104802876 Tarenaya hassleriana HOM05D005257 ORTHO05D006425 7.0e-09 65.1 152 38.8
Actinidia21524 Actinidia chinensis HOM05D005257 ORTHO05D006425 1.2e-08 64.3 159 37.1
AT5G17930 Arabidopsis thaliana HOM05D005257 ORTHO05D006425 1.2e-08 64.3 157 36.9
Migut.J00763 Erythranthe guttata HOM05D005257 ORTHO05D006425 1.2e-08 64.3 198 38.9
Dinv05572 Davidia involucrata HOM05D005257 ORTHO05D006425 1.6e-08 63.9 152 39.5
SEGI_02339 Sequoiadendron giganteum HOM05D005257 ORTHO05D006425 1.6e-08 63.9 172 39.5
C02p09500 Brassica napus HOM05D005257 ORTHO05D006425 4.6e-08 62.4 188 34.0
Carub.0006s1614 Capsella rubella HOM05D005257 ORTHO05D006425 6.0e-08 62.0 94 44.7
Thhalv10012737m.g Eutrema salsugineum HOM05D005257 ORTHO05D006425 1.0e-07 61.2 160 38.1
Pp3c3_21680 Physcomitrium patens HOM05D005257 ORTHO05D006425 1.3e-07 60.8 154 38.3
Pp3c3_21687 Physcomitrium patens HOM05D005257 ORTHO05D006425 1.3e-07 60.8 154 38.3
MELO3C008815.2 Cucumis melo HOM05D005257 ORTHO05D006425 1.7e-07 60.5 87 44.8
CiPaw.09G164800 Carya illinoinensis HOM05D005257 ORTHO05D006425 2.3e-07 60.1 194 36.1
CsaV3_4G012150 Cucumis sativus L. HOM05D005257 ORTHO05D006425 2.3e-07 60.1 95 45.3
Cc06_g07290 Coffea canephora HOM05D005257 ORTHO05D006425 3.9e-07 59.3 160 37.5
HPP92_025446 Vanilla planifolia HOM05D005257 ORTHO05D006425 3.9e-07 59.3 59 62.7
BcaB05g23293 Brassica carinata HOM05D005257 ORTHO05D006425 1.5e-06 57.4 162 36.4
Lsat_1_v5_gn_9_60281 Lactuca sativa HOM05D005257 ORTHO05D006425 1.5e-06 57.4 84 45.2
Hma1.2p1_0768F.1_g215590 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 1.9e-06 57.0 217 34.6
Aqoxy1G00543 Aquilegia oxysepala HOM05D005257 ORTHO05D006425 2.5e-06 56.6 170 35.9
DCAR_003248 Daucus carota HOM05D005257 ORTHO05D006425 2.5e-06 56.6 176 36.4
ClCG04G005430 Citrullus lanatus HOM05D005257 ORTHO05D006425 3.3e-06 56.2 112 42.0
Gohir.D11G243400 Gossypium hirsutum HOM05D005257 ORTHO05D006425 4.3e-06 55.8 82 50.0
Gorai.007G258400 Gossypium raimondii HOM05D005257 ORTHO05D006425 4.3e-06 55.8 82 50.0
HanXRQChr02g0058981 Helianthus annuus HOM05D005257 ORTHO05D006425 5.6e-06 55.5 236 29.7
Nitab4.5_0001606g0020 Nicotiana tabacum HOM05D005257 ORTHO05D006425 5.6e-06 55.5 80 42.5
AUR62039715 Chenopodium quinoa HOM05D005257 ORTHO05D006425 7.3e-06 55.1 144 40.3


User provided reference genes

Program Settings