Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os05g0136100 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 3.3e-111 405.6 298 100.0
Os05g0277200 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 6.3e-54 215.3 306 52.6
Zm00001eb417400 Zea mays HOM05D003268 ORTHO05D003719 4.0e-40 169.5 168 57.7
Os01g0245600 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 1.9e-21 107.5 205 45.9
Zm00001eb129830 Zea mays HOM05D003268 ORTHO05D003719 4.3e-18 96.3 168 38.7
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.1e-13 81.6 146 39.7
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 7.1e-13 79.0 146 37.7
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 2.7e-12 77.0 132 40.2
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 2.7e-12 77.0 142 38.7
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 1.0e-11 75.1 142 36.6
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 5.1e-11 72.8 158 35.4
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 1.1e-10 71.6 137 37.2
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 1.5e-10 71.2 162 33.3
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.5e-10 70.5 138 37.7
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 2.5e-10 70.5 138 37.7
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 2.5e-10 70.5 131 38.9
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 5.6e-10 69.3 146 35.6
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 7.3e-10 68.9 160 37.5
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 7.3e-10 68.9 142 36.6
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 9.5e-10 68.6 163 34.4
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 9.5e-10 68.6 163 34.4
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 1.2e-09 68.2 135 38.5
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.2e-09 68.2 138 37.0
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 1.6e-09 67.8 146 34.2
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 1.6e-09 67.8 146 34.2
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 4.7e-09 66.2 154 32.5
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 4.7e-09 66.2 138 38.4
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 8.1e-09 65.5 142 35.2
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 8.1e-09 65.5 145 33.8
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.1e-08 65.1 149 34.2
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 1.4e-08 64.7 171 34.5
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 2.3e-08 63.9 173 34.7
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 3.1e-08 63.5 129 35.7
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 5.2e-08 62.8 143 35.7
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 6.8e-08 62.4 138 32.6
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 1.2e-07 61.6 155 31.6
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 2.0e-07 60.8 139 35.3
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.0e-07 60.8 159 34.0
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 2.0e-07 60.8 150 32.0
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 2.6e-07 60.5 145 33.8
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 3.4e-07 60.1 139 32.4
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 3.4e-07 60.1 177 32.2
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 4.4e-07 59.7 142 36.6
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 4.4e-07 59.7 163 33.1
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 4.4e-07 59.7 172 31.4
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 4.4e-07 59.7 141 34.0
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 5.8e-07 59.3 145 33.1
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 7.6e-07 58.9 165 32.7
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 9.9e-07 58.5 150 33.3
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 1.3e-06 58.2 148 33.1
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.7e-06 57.8 157 32.5
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.7e-06 57.8 159 33.3
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 2.2e-06 57.4 145 33.1
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 2.9e-06 57.0 144 33.3
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 2.9e-06 57.0 154 32.5
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 2.9e-06 57.0 145 32.4
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.9e-06 57.0 139 30.9
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 2.9e-06 57.0 139 30.9
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 2.9e-06 57.0 155 31.6
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 3.8e-06 56.6 158 32.3
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 3.8e-06 56.6 146 33.6
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 3.8e-06 56.6 145 33.1
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 3.8e-06 56.6 145 33.1
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 3.8e-06 56.6 142 31.7
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 4.9e-06 56.2 130 30.0
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 4.9e-06 56.2 146 32.2
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 6.4e-06 55.8 165 30.3
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 8.4e-06 55.5 135 31.9


User provided reference genes

Program Settings