Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0692800 Oryza sativa ssp. japonica HOM05D005286 ORTHO05D006348 1.5e-81 306.2 168 100.0
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 5.3e-58 228.0 140 78.6
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 1.6e-33 146.7 156 46.2
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 4.5e-33 145.2 136 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 3.8e-32 142.1 140 50.0
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 1.6e-30 136.7 142 51.4
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.6e-30 136.7 145 44.8
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 2.7e-30 136.0 140 49.3
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 3.6e-30 135.6 143 49.0
SEGI_37681 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 6.1e-30 134.8 140 49.3
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 8.0e-30 134.4 139 52.5
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-29 134.0 146 47.9
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-29 134.0 146 47.9
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-29 134.0 146 47.9
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 1.8e-29 133.3 143 49.0
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 1.8e-29 133.3 144 49.3
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 3.0e-29 132.5 146 44.5
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 4.0e-29 132.1 137 49.6
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 4.0e-29 132.1 143 49.0
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 6.8e-29 131.3 146 47.9
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 1.2e-28 130.6 142 47.2
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.5e-28 130.2 140 47.1
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 1.5e-28 130.2 147 48.3
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.5e-28 130.2 145 46.9
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 2.6e-28 129.4 143 46.9
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 2.6e-28 129.4 143 46.9
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 2.6e-28 129.4 154 43.5
CDE08G1426 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 3.4e-28 129.0 142 46.5
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 3.4e-28 129.0 148 47.3
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 3.4e-28 129.0 148 48.0
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 3.4e-28 129.0 142 50.7
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 4.4e-28 128.6 143 46.9
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 4.4e-28 128.6 143 46.9
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 4.4e-28 128.6 143 45.5
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 4.4e-28 128.6 146 47.3
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 4.4e-28 128.6 143 46.9
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 5.7e-28 128.3 148 47.3
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 5.7e-28 128.3 152 46.1
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 5.7e-28 128.3 147 46.3
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 5.7e-28 128.3 144 47.9
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 9.8e-28 127.5 147 49.0
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 9.8e-28 127.5 146 47.3
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 9.8e-28 127.5 146 46.6
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.3e-27 127.1 152 46.1
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 1.3e-27 127.1 146 45.2
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 1.3e-27 127.1 149 47.0
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.7e-27 126.7 146 46.6
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 1.7e-27 126.7 143 48.3
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 1.7e-27 126.7 144 48.6
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 2.2e-27 126.3 146 45.9
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.2e-27 126.3 146 45.9
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.2e-27 126.3 147 46.9
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 2.2e-27 126.3 141 47.5
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 2.8e-27 125.9 145 47.6
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 2.8e-27 125.9 147 48.3
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 3.7e-27 125.6 140 46.4
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 3.7e-27 125.6 146 47.3
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 3.7e-27 125.6 146 47.3
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 3.7e-27 125.6 147 45.6
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 3.7e-27 125.6 146 47.3
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 3.7e-27 125.6 142 43.7
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 3.7e-27 125.6 153 47.7
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 4.8e-27 125.2 142 47.9
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 4.8e-27 125.2 147 47.6
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 6.3e-27 124.8 146 46.6
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 6.3e-27 124.8 144 47.2
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 8.3e-27 124.4 146 45.2
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 8.3e-27 124.4 146 45.2
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 8.3e-27 124.4 143 46.2
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 8.3e-27 124.4 141 46.8
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 8.3e-27 124.4 138 44.9
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 8.3e-27 124.4 143 46.9
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 1.1e-26 124.0 144 47.9
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.1e-26 124.0 147 46.3
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.1e-26 124.0 147 46.3
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 1.1e-26 124.0 148 44.6
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 1.4e-26 123.6 147 45.6
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 1.4e-26 123.6 140 45.7
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 1.4e-26 123.6 150 46.7
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 1.4e-26 123.6 150 43.3
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 1.4e-26 123.6 146 46.6
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 1.8e-26 123.2 145 46.9
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 1.8e-26 123.2 147 46.3
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 3.1e-26 122.5 141 45.4
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 3.1e-26 122.5 145 44.1
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 4.1e-26 122.1 148 44.6
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 5.4e-26 121.7 142 43.7
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 5.4e-26 121.7 141 44.0
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 7.0e-26 121.3 144 46.5
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 7.0e-26 121.3 143 46.2
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 7.0e-26 121.3 142 45.8
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 7.0e-26 121.3 146 46.6
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 7.0e-26 121.3 141 44.7
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 1.2e-25 120.6 143 47.6
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 1.2e-25 120.6 148 45.3
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.2e-25 120.6 148 44.6
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 1.6e-25 120.2 147 47.6
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 1.6e-25 120.2 143 44.8
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 1.6e-25 120.2 140 45.7
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 2.0e-25 119.8 145 45.5
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 3.5e-25 119.0 152 41.4
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 3.5e-25 119.0 143 43.4
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 4.5e-25 118.6 143 45.5
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 4.5e-25 118.6 148 45.3
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 7.7e-25 117.9 143 43.4
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 1.3e-24 117.1 143 44.1
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.9e-24 115.9 139 43.2
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 3.8e-24 115.5 144 44.4
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 6.5e-24 114.8 141 44.0
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.9e-23 113.2 141 43.3
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 4.7e-22 108.6 138 43.5
RcHm_v2.0_Chr6g0261231 Rosa chinensis HOM05D005286 ORTHO05D006348 6.8e-21 104.8 112 48.2
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.4e-18 97.1 99 47.5
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.7e-17 92.8 129 40.3
Cpa.g.sc37.6 Carica papaya HOM05D005286 ORTHO05D006348 1.7e-16 90.1 100 48.0
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.9e-15 86.7 102 42.2
CSS0025385 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.2e-14 84.0 138 38.4
CBR_g8549 Chara braunii HOM05D005286 ORTHO05D006348 1.6e-14 83.6 148 39.2
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 6.1e-14 81.6 99 42.4
Nitab4.5_0008217g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.7e-11 73.6 103 35.0
Cfa022134 Carpinus fangiana HOM05D005286 ORTHO05D006348 1.0e-08 64.3 146 33.6
Nitab4.5_0002142g0070 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.8e-06 56.2 62 45.2


User provided reference genes

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