Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 4.9e-151 537.7 263 100.0
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 9.3e-118 427.2 264 76.5
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 5.3e-81 305.1 258 57.4
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 8.5e-79 297.7 189 72.0
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 1.1e-78 297.4 258 55.4
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 1.1e-78 297.4 261 54.8
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 2.5e-78 296.2 259 57.1
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 7.2e-78 294.7 259 54.8
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 2.1e-77 293.1 214 58.9
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 2.7e-77 292.7 259 56.0
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 4.7e-77 292.0 259 55.6
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 1.8e-76 290.0 262 55.7
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 3.0e-76 289.3 261 55.9
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 4.0e-76 288.9 263 56.3
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 4.0e-76 288.9 259 55.2
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 8.8e-76 287.7 258 55.8
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 3.4e-75 285.8 259 53.7
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 7.5e-75 284.6 259 54.1
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 4.8e-74 282.0 259 54.8
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 4.8e-74 282.0 259 52.5
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 4.8e-74 282.0 259 53.3
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 1.4e-73 280.4 262 54.2
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 1.8e-73 280.0 259 52.5
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 1.8e-73 280.0 259 54.8
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 2.4e-73 279.6 259 53.7
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 3.1e-73 279.3 263 53.2
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 4.1e-73 278.9 259 52.9
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 4.1e-73 278.9 259 54.1
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 5.4e-73 278.5 258 55.4
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 7.0e-73 278.1 259 53.3
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 9.1e-73 277.7 263 52.5
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 9.1e-73 277.7 260 49.6
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 2.0e-72 276.6 258 53.9
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 2.7e-72 276.2 251 55.4
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 2.7e-72 276.2 259 52.9
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 2.7e-72 276.2 215 60.9
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 4.5e-72 275.4 260 50.8
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 4.5e-72 275.4 259 53.3
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 4.5e-72 275.4 273 51.6
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 5.9e-72 275.0 259 52.5
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 7.7e-72 274.6 251 55.4
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 1.0e-71 274.2 263 55.9
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 1.0e-71 274.2 261 52.5
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 1.3e-71 273.9 260 53.1
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 1.3e-71 273.9 259 52.9
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 2.3e-71 273.1 215 61.9
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 2.9e-71 272.7 260 52.3
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 2.9e-71 272.7 215 58.6
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 2.9e-71 272.7 263 51.3
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 3.8e-71 272.3 251 55.0
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 3.8e-71 272.3 258 54.3
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 3.8e-71 272.3 258 49.6
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 5.0e-71 271.9 279 53.8
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 6.5e-71 271.6 215 58.1
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 8.6e-71 271.2 264 51.5
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 8.6e-71 271.2 259 51.7
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 1.1e-70 270.8 263 51.3
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 1.5e-70 270.4 259 49.0
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 1.9e-70 270.0 221 60.2
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 2.5e-70 269.6 261 52.1
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 4.2e-70 268.9 259 52.1
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 5.5e-70 268.5 259 49.8
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 5.5e-70 268.5 261 52.1
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 5.5e-70 268.5 259 52.1
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.2e-70 268.1 261 52.1
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.2e-70 268.1 207 61.4
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.2e-70 268.1 207 61.4
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 2.1e-69 266.5 261 51.7
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 2.8e-69 266.2 262 50.4
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 2.8e-69 266.2 267 49.4
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 6.1e-69 265.0 262 51.1
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 8.0e-69 264.6 261 51.7
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 8.0e-69 264.6 261 51.7
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 8.0e-69 264.6 243 53.5
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 1.4e-68 263.8 262 50.0
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 1.8e-68 263.5 297 46.5
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 6.8e-68 261.5 262 49.2
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 7.5e-67 258.1 250 50.4
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.7e-66 256.9 255 51.8
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 2.2e-66 256.5 251 51.4
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.2e-66 256.5 252 52.0
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.4e-65 253.8 262 48.9
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 3.1e-65 252.7 301 43.2
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 7.0e-65 251.5 218 56.0
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 1.6e-64 250.4 200 60.5
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 2.0e-64 250.0 240 51.7
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 3.5e-64 249.2 240 52.1
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 3.5e-64 249.2 237 51.9
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 5.9e-64 248.4 291 47.4
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.3e-62 242.3 240 51.7
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.3e-62 242.3 240 52.1
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 9.5e-62 241.1 274 45.6
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.1e-61 240.0 200 58.0
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 5.2e-60 235.3 258 46.1
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 5.2e-60 235.3 323 44.0
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 6.8e-60 235.0 213 56.8
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 1.3e-58 230.7 257 48.6
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 2.9e-58 229.6 243 49.0
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 4.9e-58 228.8 218 51.4
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 2.4e-57 226.5 207 55.1
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 2.4e-57 226.5 279 44.1
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 5.0e-55 218.8 193 55.4
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 8.0e-53 211.5 220 51.4
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 1.1e-52 211.1 196 53.1
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 3.1e-52 209.5 180 54.4
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 2.0e-51 206.8 299 38.8
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 2.6e-51 206.5 225 47.1
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 2.0e-48 196.8 212 49.1
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 6.0e-48 195.3 265 44.2
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 7.8e-48 194.9 225 45.3
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 2.8e-45 186.4 188 48.4
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 8.1e-45 184.9 185 51.4
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 4.0e-44 182.6 173 53.2
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 1.3e-42 177.6 219 43.4
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 4.9e-42 175.6 255 39.6
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 2.7e-40 169.9 175 47.4
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 1.0e-39 167.9 216 42.1
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 6.6e-39 165.2 169 50.9
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 8.6e-39 164.9 141 57.4
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 2.4e-36 156.8 129 56.6
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 2.6e-35 153.3 168 48.8
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 8.4e-34 148.3 151 49.0
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.1e-33 147.9 152 48.0
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 1.4e-33 147.5 351 31.9
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.9e-33 147.1 223 40.4
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 4.1e-33 146.0 144 48.6
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 3.5e-32 142.9 139 51.1
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 1.0e-31 141.4 269 33.8
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 1.5e-27 127.5 268 32.8
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 2.0e-27 127.1 111 54.1
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 4.4e-27 125.9 129 47.3
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 5.8e-27 125.6 112 56.2
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 2.2e-26 123.6 130 48.5
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 9.3e-25 118.2 203 37.9
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 6.6e-23 112.1 152 42.1
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 9.0e-20 101.7 85 56.5
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 4.5e-19 99.4 96 55.2
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 5.8e-19 99.0 85 55.3
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 7.6e-19 98.6 85 55.3
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.7e-18 97.4 85 54.1
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 3.8e-18 96.3 148 40.5
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 9.3e-17 91.7 240 31.2
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 2.1e-16 90.5 74 56.8
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 1.3e-15 87.8 75 58.7
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 7.4e-14 82.0 66 50.0
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.1e-13 80.5 66 48.5
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.8e-13 80.1 66 48.5
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-13 80.1 89 46.1
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 4.8e-13 79.3 71 54.9
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 4.8e-13 79.3 68 57.4
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 4.0e-12 76.3 51 58.8
RcHm_v2.0_Chr7g0204241 Rosa chinensis HOM05D004561 ORTHO05D005315 4.9e-10 69.3 83 43.4
SHI05337 Sapria himalayana HOM05D004561 ORTHO05D005315 3.2e-09 66.6 45 66.7
SalBow1G6765 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.7e-08 63.5 83 39.8
FvH4_5g18980 Fragaria vesca HOM05D004561 ORTHO05D005315 1.3e-07 61.2 48 54.2
RcHm_v2.0_Chr7g0204201 Rosa chinensis HOM05D004561 ORTHO05D005315 3.9e-07 59.7 83 39.8
SalBow1G4445 Salvia bowleyana HOM05D025598 ORTHO05D005315 3.9e-07 59.7 67 43.3


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