Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0674000 Oryza sativa ssp. japonica HOM05D033948 ORTHO05D037255 8.1e-164 580.5 322 100.0
Zm00001eb066540 Zea mays HOM05D033948 ORTHO05D037255 1.6e-74 283.9 320 60.9
Zm00001eb433520 Zea mays HOM05D033948 ORTHO05D037255 2.4e-59 233.4 325 55.7
MBI06_g12840_MAGBIO Magnolia biondii HOM05D002440 ORTHO05D002576 1.9e-19 100.9 326 32.5
HPP92_008563 Vanilla planifolia HOM05D000140 ORTHO05D000087 1.2e-18 98.2 279 34.4
DCAR_002564 Daucus carota HOM05D002440 ORTHO05D002576 2.1e-15 87.4 307 31.3
Haze_11734 Corylus avellana HOM05D002440 ORTHO05D002576 3.7e-15 86.7 298 31.9
Sabra08G0063500 Salix brachista HOM05D002440 ORTHO05D002576 8.1e-15 85.5 272 29.8
Hma1.2p1_1278F.1_g272260 Hydrangea macrophylla HOM05D002440 ORTHO05D002576 3.1e-14 83.6 288 31.6
Cfa008722 Carpinus fangiana HOM05D002440 ORTHO05D002576 9.0e-14 82.0 308 31.5
Cfa008723 Carpinus fangiana HOM05D002440 ORTHO05D002576 9.0e-14 82.0 308 31.5
TAR622G0810 Trochodendron aralioides HOM05D002440 ORTHO05D002576 3.4e-13 80.1 310 30.0
Rhsim09G0072500 Rhododendron simsii HOM05D002440 ORTHO05D002576 1.0e-12 78.6 305 31.8
Potri.008G085600 Populus trichocarpa HOM05D002440 ORTHO05D002576 5.5e-11 72.8 300 29.3
Potri.010G171000 Populus trichocarpa HOM05D002440 ORTHO05D002576 4.6e-10 69.7 279 28.7
Sabra10G0130500 Salix brachista HOM05D002440 ORTHO05D002576 3.9e-09 66.6 279 27.2
DCAR_023440 Daucus carota HOM05D002440 ORTHO05D002576 4.3e-08 63.2 291 27.1
Prupe.1G344800 Prunus persica HOM05D002440 ORTHO05D002576 1.3e-07 61.6 304 28.9
MD13G1008300 Malus domestica HOM05D002440 ORTHO05D002576 2.1e-07 60.8 362 29.0
THA.LOC104801398 Tarenaya hassleriana HOM05D002440 ORTHO05D002576 1.4e-06 58.2 247 27.5
CDE07G0381 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 5.3e-06 56.2 285 28.4
FAN12G1782 Fragaria x ananassa HOM05D002440 ORTHO05D002576 5.3e-06 56.2 301 28.2
FAN07G1311 Fragaria x ananassa HOM05D002440 ORTHO05D002576 6.9e-06 55.8 297 28.6
FvH4_4g36680 Fragaria vesca HOM05D002440 ORTHO05D002576 9.0e-06 55.5 301 26.6
TWI74G0980 Tripterygium wilfordii HOM05D002440 ORTHO05D002576 9.0e-06 55.5 332 30.4


User provided reference genes

Program Settings