Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 1.8e-102 375.9 193 100.0
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 4.1e-70 268.5 185 77.3
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 7.7e-69 264.2 171 80.1
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 2.2e-47 193.0 180 56.1
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 5.3e-46 188.3 159 60.4
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 9.1e-46 187.6 181 50.8
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 3.5e-45 185.7 154 57.8
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 7.7e-45 184.5 173 55.5
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 1.7e-44 183.3 197 49.2
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 2.9e-44 182.6 174 53.4
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 2.9e-44 182.6 157 59.2
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 6.5e-44 181.4 151 60.3
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 6.5e-44 181.4 157 58.6
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 6.5e-44 181.4 173 53.8
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 1.9e-43 179.9 142 61.3
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 1.9e-43 179.9 179 53.1
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 4.2e-43 178.7 157 56.1
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 4.2e-43 178.7 143 59.4
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 5.5e-43 178.3 153 53.6
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.2e-42 177.2 160 55.0
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 1.2e-42 177.2 181 51.9
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 2.1e-42 176.4 157 58.0
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 2.7e-42 176.0 157 56.1
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 3.6e-42 175.6 144 59.7
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 3.6e-42 175.6 181 51.4
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 3.6e-42 175.6 173 55.5
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 4.7e-42 175.3 180 48.3
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 4.7e-42 175.3 157 58.0
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 6.1e-42 174.9 151 53.6
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 6.1e-42 174.9 143 61.5
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 6.1e-42 174.9 184 49.5
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 8.0e-42 174.5 185 51.4
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 8.0e-42 174.5 157 52.9
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 8.0e-42 174.5 186 50.5
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.0e-41 174.1 173 54.9
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 1.0e-41 174.1 174 53.4
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.4e-41 173.7 154 52.6
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 1.8e-41 173.3 166 51.8
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.8e-41 173.3 155 57.4
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 2.3e-41 172.9 154 52.6
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 3.0e-41 172.6 191 49.7
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 3.0e-41 172.6 171 49.7
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 4.0e-41 172.2 186 51.6
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 4.0e-41 172.2 157 56.7
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 8.8e-41 171.0 147 59.2
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 1.2e-40 170.6 157 56.1
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 1.5e-40 170.2 166 51.8
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 2.0e-40 169.9 190 48.9
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 2.0e-40 169.9 163 51.5
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 2.0e-40 169.9 142 54.9
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 4.4e-40 168.7 155 56.1
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 5.7e-40 168.3 157 54.1
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 7.5e-40 167.9 170 51.8
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 9.8e-40 167.5 157 55.4
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.3e-39 167.2 184 51.6
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 1.7e-39 166.8 157 53.5
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 2.8e-39 166.0 181 51.4
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 3.7e-39 165.6 188 46.8
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 4.9e-39 165.2 174 48.3
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 4.9e-39 165.2 184 51.1
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 8.3e-39 164.5 157 49.7
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 8.3e-39 164.5 191 47.1
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.4e-38 163.7 157 50.3
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.8e-38 163.3 157 49.7
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 1.8e-38 163.3 193 46.1
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.4e-38 162.9 157 49.0
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.4e-38 162.9 157 49.0
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 5.4e-38 161.8 163 49.1
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 1.2e-37 160.6 171 52.0
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.6e-37 160.2 157 49.0
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 2.7e-37 159.5 143 56.6
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 3.5e-37 159.1 146 56.2
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 3.5e-37 159.1 151 53.0
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 4.5e-37 158.7 150 54.0
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 2.9e-36 156.0 194 46.4
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 3.8e-36 155.6 165 48.5
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 5.0e-36 155.2 182 46.7
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 5.0e-36 155.2 165 47.9
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.9e-35 153.3 151 53.0
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 5.5e-35 151.8 160 47.5
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 7.2e-35 151.4 151 51.0
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 9.5e-35 151.0 151 51.0
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 1.2e-34 150.6 151 51.0
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-34 150.6 151 51.0
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-34 150.6 151 51.0
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 1.2e-34 150.6 151 51.0
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.0e-33 146.0 132 56.8
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 8.9e-33 144.4 175 47.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 5.7e-32 141.7 126 54.0
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 9.8e-32 141.0 152 48.7
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 9.8e-32 141.0 184 44.6
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 2.2e-31 139.8 140 53.6
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 5.9e-29 131.7 110 59.1
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 1.7e-28 130.2 125 50.4
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-28 129.8 173 38.7
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.1e-27 127.5 106 53.8
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 3.3e-27 125.9 135 46.7
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 3.3e-27 125.9 125 49.6
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 1.8e-25 120.2 98 59.2
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 9.8e-24 114.4 103 56.3
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 2.2e-23 113.2 102 56.9
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 8.3e-23 111.3 177 39.0
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 3.2e-22 109.4 127 42.5
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.3e-20 103.2 176 37.5
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 3.0e-20 102.8 106 50.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.1e-19 100.9 73 58.9
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 1.9e-19 100.1 94 55.3
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 9.5e-19 97.8 108 45.4
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 2.8e-18 96.3 95 55.8
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 1.1e-17 94.4 134 41.0
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-17 94.4 83 56.6
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 6.8e-17 91.7 122 40.2
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 6.8e-17 91.7 122 40.2
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 8.9e-17 91.3 159 36.5
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 1.2e-16 90.9 82 53.7
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 9.2e-14 81.3 106 39.6
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-13 80.9 87 47.1
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.2e-13 80.9 52 69.2
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 1.7e-12 77.0 70 55.7
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 4.3e-11 72.4 86 46.5
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 5.6e-11 72.0 202 30.7
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 2.6e-08 63.2 64 43.8
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 7.6e-08 61.6 43 58.1
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 9.9e-08 61.2 68 41.2
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 2.9e-07 59.7 107 34.6
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 6.4e-07 58.5 135 31.1
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 7.1e-06 55.1 64 40.6


User provided reference genes

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