Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 5.5e-153 544.3 277 100.0
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 4.3e-81 305.4 285 61.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 6.7e-50 201.8 217 50.7
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 2.6e-49 199.9 169 56.2
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 5.7e-49 198.7 190 52.1
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.7e-48 197.2 169 56.2
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.8e-48 196.4 168 57.1
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 2.8e-48 196.4 197 53.8
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.8e-48 195.7 169 55.6
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 6.3e-48 195.3 183 52.5
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 8.2e-48 194.9 166 54.8
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.8e-47 193.7 273 44.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 2.4e-47 193.4 170 54.7
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 2.4e-47 193.4 203 49.3
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 2.4e-47 193.4 169 55.0
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 2.4e-47 193.4 242 46.3
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.4e-47 193.4 193 52.3
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 3.1e-47 193.0 169 56.2
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 3.1e-47 193.0 270 44.4
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 4.1e-47 192.6 187 52.4
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.3e-47 192.2 273 43.6
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 5.3e-47 192.2 195 52.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 6.9e-47 191.8 169 54.4
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 6.9e-47 191.8 190 49.5
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.2e-46 191.0 250 45.2
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 1.5e-46 190.7 192 53.1
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.5e-46 190.7 260 44.6
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 2.0e-46 190.3 198 49.0
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.4e-46 189.5 169 54.4
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 3.4e-46 189.5 164 51.2
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 4.5e-46 189.1 198 50.0
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 5.9e-46 188.7 181 53.6
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 7.7e-46 188.3 215 45.1
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 7.7e-46 188.3 198 49.5
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 7.7e-46 188.3 183 50.8
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.3e-45 187.6 167 55.7
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.2e-45 186.8 202 51.0
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.2e-45 186.8 190 51.1
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 5.0e-45 185.7 258 41.9
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.1e-44 184.5 191 48.7
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.4e-44 184.1 167 53.3
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.4e-44 184.1 175 52.6
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 1.4e-44 184.1 182 51.6
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.4e-44 184.1 221 46.2
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.9e-44 183.7 191 49.2
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.5e-44 182.2 163 55.8
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 5.5e-44 182.2 167 53.9
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 9.4e-44 181.4 186 49.5
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.2e-43 181.0 178 51.1
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.6e-43 180.6 206 46.6
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.6e-43 180.6 188 51.1
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.1e-43 180.3 172 52.9
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 2.7e-43 179.9 196 47.4
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.6e-43 179.5 194 49.5
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.6e-43 179.5 167 52.7
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 3.6e-43 179.5 239 45.6
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.7e-43 179.1 200 46.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 6.1e-43 178.7 172 49.4
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 6.1e-43 178.7 191 48.2
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 6.1e-43 178.7 196 48.5
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 7.9e-43 178.3 164 53.0
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.4e-42 177.6 195 49.7
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.8e-42 177.2 173 49.7
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.8e-42 177.2 164 53.0
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.3e-42 176.8 166 51.8
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 2.3e-42 176.8 175 49.7
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 3.0e-42 176.4 199 45.7
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 3.0e-42 176.4 195 47.2
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.9e-42 176.0 259 41.7
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 3.9e-42 176.0 164 52.4
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 5.2e-42 175.6 167 50.9
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 8.8e-42 174.9 168 49.4
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 8.8e-42 174.9 168 49.4
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 8.8e-42 174.9 196 47.4
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 8.8e-42 174.9 197 46.2
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.0e-41 173.7 187 46.5
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 3.3e-41 172.9 168 48.8
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 3.3e-41 172.9 196 46.9
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 4.4e-41 172.6 168 48.2
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 4.4e-41 172.6 220 41.4
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 5.7e-41 172.2 168 48.8
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 5.7e-41 172.2 169 46.2
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 1.7e-40 170.6 211 41.2
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.2e-40 170.2 214 42.1
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 2.8e-40 169.9 181 47.5
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 6.3e-40 168.7 188 47.3
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 6.3e-40 168.7 217 40.1
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.4e-39 166.8 217 40.6
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 7.0e-39 165.2 212 41.0
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.0e-38 163.7 210 43.8
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.6e-38 163.3 200 43.5
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 3.8e-37 159.5 211 41.2
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.1e-36 157.9 250 37.2
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.5e-36 157.5 244 36.5
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.0e-34 151.4 154 50.0
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 3.7e-32 142.9 229 38.9
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 5.3e-31 139.0 121 52.9
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 7.0e-31 138.7 124 51.6
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.7e-29 134.0 191 38.2
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 8.8e-26 121.7 162 42.0
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.6e-25 120.2 124 43.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 5.7e-25 119.0 160 39.4
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 3.8e-21 106.3 97 55.7
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 2.5e-20 103.6 71 70.4
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 8.0e-19 98.6 99 53.5
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 1.0e-18 98.2 237 27.8
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 5.4e-15 85.9 96 42.7
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 1.6e-11 74.3 211 29.4


User provided reference genes

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