Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0624701 Oryza sativa ssp. japonica HOM05D007398 ORTHO05D004912 3.7e-57 224.9 138 100.0
Zm00001eb070220 Zea mays HOM05D007398 ORTHO05D004912 1.3e-33 146.7 138 70.3
Zm00001eb431260 Zea mays HOM05D007398 ORTHO05D004912 7.5e-26 120.9 140 63.6
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.1e-08 63.9 122 39.3
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.4e-08 63.5 127 40.9
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 1.9e-08 63.2 127 39.4
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 4.1e-08 62.0 105 51.4
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 5.4e-08 61.6 128 38.3
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 5.4e-08 61.6 137 42.3
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 2.7e-07 59.3 119 38.7
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 3.5e-07 58.9 124 37.9
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 4.6e-07 58.5 109 37.6
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 6.0e-07 58.2 122 38.5
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.0e-06 57.4 105 40.0
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 1.7e-06 56.6 107 40.2
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.3e-06 56.2 98 39.8
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 3.0e-06 55.8 129 38.8
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 3.9e-06 55.5 122 36.9
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 5.1e-06 55.1 129 38.8
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 5.1e-06 55.1 122 41.0
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 6.6e-06 54.7 102 40.2
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 6.6e-06 54.7 126 37.3


User provided reference genes

Program Settings