Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 2.2e-205 718.8 368 100.0
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 7.6e-150 534.3 438 65.3
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 1.0e-98 364.4 430 48.4
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 1.1e-97 360.9 391 50.4
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 4.1e-95 352.4 430 46.7
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 9.1e-95 351.3 433 46.0
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 1.0e-93 347.8 405 48.1
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 5.0e-93 345.5 435 45.7
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 4.2e-92 342.4 406 47.0
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 6.1e-91 338.6 430 45.8
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 1.3e-88 330.9 391 48.8
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 2.2e-88 330.1 400 46.0
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 7.0e-87 325.1 395 46.1
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 7.0e-87 325.1 474 40.1
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 1.6e-86 323.9 353 50.7
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 2.0e-86 323.6 357 48.7
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 3.8e-85 319.3 386 46.6
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 8.5e-85 318.2 403 45.7
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 2.5e-84 316.6 393 46.8
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 2.5e-84 316.6 308 56.5
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 3.2e-84 316.2 432 44.0
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 2.7e-83 313.2 401 44.6
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 1.0e-82 311.2 378 47.4
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.8e-82 310.5 402 44.0
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.2e-81 307.8 391 45.5
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 7.5e-81 305.1 401 43.4
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.7e-80 303.9 432 41.4
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 3.7e-80 302.8 393 45.8
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 6.3e-80 302.0 398 44.0
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 1.6e-78 297.4 394 44.9
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 2.7e-78 296.6 392 45.7
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 4.5e-78 295.8 405 45.2
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 6.6e-77 292.0 397 42.8
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 1.1e-76 291.2 399 42.6
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 9.5e-76 288.1 348 45.4
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 1.2e-75 287.7 414 43.5
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 3.6e-75 286.2 360 45.6
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 8.0e-75 285.0 394 42.6
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 1.0e-74 284.6 394 41.6
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 7.0e-71 271.9 346 44.8
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 8.9e-66 255.0 352 44.0
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 1.3e-64 251.1 393 39.9
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 1.9e-63 247.3 266 51.5
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 2.3e-61 240.4 299 47.5
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.9e-56 223.4 419 36.0
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 4.4e-49 199.5 296 42.2
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 5.8e-49 199.1 187 60.4
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 4.1e-47 193.0 404 36.1
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 1.6e-46 191.0 432 30.3
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 3.9e-37 159.8 359 31.8
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.0e-29 135.2 137 51.1
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 5.1e-29 132.9 255 34.1
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.6e-22 111.3 124 45.2
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.6e-22 111.3 96 64.6
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 5.8e-17 92.8 63 73.0
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 3.8e-16 90.1 104 48.1
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 2.4e-10 70.9 51 60.8
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 2.9e-08 63.9 62 54.8


User provided reference genes

Program Settings