Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0523812 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 1.9e-147 525.8 266 100.0
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 1.9e-78 296.6 266 65.8
Zm00001eb426910 Zea mays HOM05D031261 ORTHO05D010602 1.4e-28 131.0 131 63.4
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 5.5e-17 92.4 181 40.9
Manes.01G120601 Manihot esculenta HOM05D014563 ORTHO05D010602 2.6e-11 73.6 120 42.5
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 3.8e-10 69.7 204 35.8
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 8.5e-10 68.6 153 35.9
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 1.1e-09 68.2 211 32.7
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.5e-09 67.8 122 42.6
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 1.5e-09 67.8 249 32.9
Os06g0343500 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 6.1e-08 62.4 151 34.4
CiPaw.15G057400 Carya illinoinensis HOM05D014563 ORTHO05D010602 1.0e-07 61.6 105 40.0
AT4G34139 Arabidopsis thaliana HOM05D014563 ORTHO05D010602 1.4e-07 61.2 47 61.7
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 1.4e-07 61.2 130 33.8
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 3.0e-07 60.1 57 47.4
CiPaw.09G003700 Carya illinoinensis HOM05D014563 ORTHO05D010602 5.2e-07 59.3 117 39.3
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 6.7e-07 58.9 194 35.1
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 3.3e-06 56.6 43 60.5


User provided reference genes

Program Settings