Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 3.8e-160 568.2 293 100.0
Os04g0523812 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 3.1e-77 292.7 266 65.8
Zm00001eb426910 Zea mays HOM05D031261 ORTHO05D010602 4.9e-35 152.5 148 64.9
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 1.5e-20 104.4 185 42.2
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 1.3e-14 84.7 213 39.9
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 4.8e-14 82.8 132 45.5
Manes.12G036450 Manihot esculenta HOM05D014563 ORTHO05D010602 6.3e-14 82.4 146 41.8
Manes.01G120601 Manihot esculenta HOM05D014563 ORTHO05D010602 4.1e-13 79.7 126 44.4
MBI15_g22231_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 2.6e-12 77.0 105 49.5
MBI15_g22229_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.1e-10 71.6 105 46.7
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 1.9e-10 70.9 260 33.8
HanXRQChr03g0091821 Helianthus annuus HOM05D010444 ORTHO05D010602 1.2e-09 68.2 64 57.8
Os06g0343500 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.1e-09 67.4 144 37.5
MBI17_g19025_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 2.3e-08 63.9 57 57.9
AT4G34139 Arabidopsis thaliana HOM05D014563 ORTHO05D010602 3.0e-08 63.5 47 61.7
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 3.9e-08 63.2 145 36.6
CiPaw.15G057400 Carya illinoinensis HOM05D014563 ORTHO05D010602 5.1e-08 62.8 103 41.7
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 2.0e-07 60.8 60 50.0
Zm00001eb323950 Zea mays HOM05D010444 ORTHO05D010602 2.0e-07 60.8 223 33.2
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 4.4e-07 59.7 193 31.1
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 4.4e-07 59.7 213 32.4
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 5.7e-07 59.3 137 35.0
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 5.7e-07 59.3 75 48.0
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 9.7e-07 58.5 141 39.0
MBI07_g06919_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.7e-06 57.8 103 39.8
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 2.2e-06 57.4 149 36.2


User provided reference genes

Program Settings