Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.8e-185 651.4 325 100.0
Os02g0583500 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 5.7e-157 557.8 284 97.9
Os11g0519100 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 1.0e-126 457.2 233 96.1
Os06g0240600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 3.5e-106 389.0 190 99.5
Os06g0271400 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 7.1e-59 231.9 212 55.2
Os04g0228600 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 5.8e-45 185.7 148 62.8
Zm00001eb176540 Zea mays HOM05D009009 ORTHO05D010828 4.9e-44 182.6 212 43.9
Zm00001eb278490 Zea mays HOM05D009009 ORTHO05D010828 1.9e-43 180.6 201 44.8
Zm00001eb276390 Zea mays HOM05D009009 ORTHO05D010828 4.2e-43 179.5 212 43.4
Zm00001eb384030 Zea mays HOM05D009009 ORTHO05D016371 2.1e-42 177.2 214 42.5
Zm00001eb308100 Zea mays HOM05D009009 ORTHO05D010828 3.5e-42 176.4 215 40.9
Zm00001eb019990 Zea mays HOM05D009009 ORTHO05D010828 3.9e-33 146.4 211 38.4
Zm00001eb423000 Zea mays HOM05D009296 ORTHO05D010828 1.5e-32 144.4 216 38.4
Zm00001eb354130 Zea mays HOM05D009296 ORTHO05D010828 1.1e-30 138.3 218 38.5
Zm00001eb176390 Zea mays HOM05D009296 ORTHO05D010828 4.1e-30 136.3 216 37.0
Os02g0241300 Oryza sativa ssp. japonica HOM05D009009 ORTHO05D010828 6.5e-28 129.0 154 40.3
Zm00001eb417100 Zea mays HOM05D009009 ORTHO05D010828 9.4e-27 125.2 150 41.3
Zm00001eb029830 Zea mays HOM05D009296 ORTHO05D010828 1.2e-26 124.8 193 36.8
Zm00001eb385530 Zea mays HOM05D009296 ORTHO05D010828 5.3e-22 109.4 163 39.3
Dinv13764 Davidia involucrata HOM05D011313 ORTHO05D013316 1.3e-20 104.8 208 28.4
Zm00001eb084650 Zea mays HOM05D009296 ORTHO05D010828 1.4e-17 94.7 165 34.5
Zm00001eb006240 Zea mays HOM05D009296 ORTHO05D010828 3.9e-17 93.2 165 33.9
Zm00001eb341730 Zea mays HOM05D009009 ORTHO05D010828 4.1e-14 83.2 113 38.1
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 1.2e-13 81.6 200 29.0
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 1.0e-12 78.6 180 28.9
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-11 74.7 214 28.0
Zm00001eb266790 Zea mays HOM05D009009 ORTHO05D010828 9.4e-11 72.0 83 38.6
COL.COLO4_16289 Corchorus olitorius HOM05D059948 ORTHO05D010661 2.1e-10 70.9 210 25.7
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 3.6e-10 70.1 211 26.5
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.6e-10 70.1 213 30.0
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.6e-10 70.1 213 30.0
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 8.0e-10 68.9 150 26.7
Dinv06183 Davidia involucrata HOM05D011313 ORTHO05D013316 2.0e-08 64.3 99 30.3
Zm00001eb308370 Zea mays HOM05D009009 ORTHO05D016371 9.7e-08 62.0 70 38.6
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.7e-07 61.2 210 26.7
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-07 61.2 203 26.6
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-07 60.1 203 26.6
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 6.3e-07 59.3 213 29.1
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-06 58.5 203 26.1
MBI14_g38741_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-06 57.8 130 27.7
MBI16_g11620_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-06 57.8 202 25.2
CSS0026212 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 2.4e-06 57.4 236 26.3
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 2.4e-06 57.4 220 25.0
CAN.G211.14 Capsicum annuum HOM05D000304 ORTHO05D010661 5.3e-06 56.2 100 30.0
CSS0009810 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 7.0e-06 55.8 242 25.6
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.1e-06 55.5 230 27.4


User provided reference genes

Program Settings