Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0517400 Oryza sativa ssp. japonica HOM05D003804 ORTHO05D004350 1.0e-168 596.7 297 100.0
Os02g0624400 Oryza sativa ssp. japonica HOM05D003804 ORTHO05D004350 1.7e-128 463.0 296 75.3
Zm00001eb426690 Zea mays HOM05D003804 ORTHO05D004350 5.2e-125 451.4 296 75.0
MBI10_g37182_MAGBIO Magnolia biondii HOM05D003804 ORTHO05D004350 7.1e-90 334.7 299 56.5
MBI07_g30495_MAGBIO Magnolia biondii HOM05D003804 ORTHO05D004350 4.3e-87 325.5 298 55.7
Dinv14606 Davidia involucrata HOM05D003804 ORTHO05D004350 7.6e-84 314.7 294 54.8
HanXRQChr08g0225481 Helianthus annuus HOM05D003804 ORTHO05D004350 7.6e-84 314.7 293 55.3
Dinv08268 Davidia involucrata HOM05D003804 ORTHO05D004350 9.9e-84 314.3 295 54.2
HanXRQChr07g0194371 Helianthus annuus HOM05D003804 ORTHO05D004350 1.3e-83 313.9 293 55.3
Lsat_1_v5_gn_8_2841 Lactuca sativa HOM05D003804 ORTHO05D004350 2.9e-83 312.8 295 53.9
Rhsim09G0137900 Rhododendron simsii HOM05D003804 ORTHO05D004350 4.2e-82 308.9 295 55.9
ECA233G2677 Erigeron canadensis HOM05D003804 ORTHO05D004350 7.1e-82 308.1 293 52.2
CSS0050159 Camellia sinensis var. sinensis HOM05D003804 ORTHO05D004350 2.7e-81 306.2 296 53.0
Duzib106G1801 Durio zibethinus HOM05D003804 ORTHO05D004350 6.0e-81 305.1 293 53.9
Duzib177G0700 Durio zibethinus HOM05D003804 ORTHO05D004350 7.9e-81 304.7 292 52.7
ECA238G1424 Erigeron canadensis HOM05D003804 ORTHO05D004350 7.9e-81 304.7 293 53.2
CSS0040175 Camellia sinensis var. sinensis HOM05D003804 ORTHO05D004350 1.0e-80 304.3 296 52.0
PGR004G0836 Punica granatum HOM05D003804 ORTHO05D004350 1.8e-80 303.5 297 53.2
CSS0024163 Camellia sinensis var. sinensis HOM05D003804 ORTHO05D004350 2.3e-80 303.1 296 52.7
Cc02_g08970 Coffea canephora HOM05D003804 ORTHO05D004350 2.3e-80 303.1 293 54.6
GSVIVG01023535001 Vitis vinifera HOM05D003804 ORTHO05D004350 3.9e-80 302.4 295 53.2
TAR636G0278 Trochodendron aralioides HOM05D003804 ORTHO05D004350 5.1e-80 302.0 299 53.8
CSS0006152 Camellia sinensis var. sinensis HOM05D003804 ORTHO05D004350 1.5e-79 300.4 296 55.4
COL.COLO4_15533 Corchorus olitorius HOM05D003804 ORTHO05D004350 1.9e-79 300.1 293 51.9
PSO063G7164 Papaver somniferum HOM05D003804 ORTHO05D004350 7.4e-79 298.1 296 51.4
CANSAT56G0982 Cannabis sativa HOM05D003804 ORTHO05D004350 9.6e-79 297.7 295 54.2
Potri.013G049100 Populus trichocarpa HOM05D003804 ORTHO05D004350 9.6e-79 297.7 293 53.2
Aqoxy2G03639 Aquilegia oxysepala HOM05D003804 ORTHO05D004350 1.3e-78 297.4 296 51.0
PSO017G7263 Papaver somniferum HOM05D003804 ORTHO05D004350 1.6e-78 297.0 296 50.7
Rhsim05G0175100 Rhododendron simsii HOM05D003804 ORTHO05D004350 2.8e-78 296.2 295 51.2
Ciclev10031149m.g Citrus clementina HOM05D003804 ORTHO05D004350 3.7e-78 295.8 298 52.3
Phvul.006G104100 Phaseolus vulgaris HOM05D003804 ORTHO05D004350 6.2e-78 295.0 295 52.5
Lj1g0028056 Lotus japonicus HOM05D003804 ORTHO05D004350 2.4e-77 293.1 295 51.9
ATR0801G001 Amborella trichopoda HOM05D003804 ORTHO05D004350 3.1e-77 292.7 298 52.0
QL03p029246 Quercus lobata HOM05D003804 ORTHO05D004350 3.1e-77 292.7 300 51.7
Lalb_Chr04g0262141 Lupinus albus HOM05D003804 ORTHO05D004350 4.0e-77 292.4 304 51.0
Psat0s3161g0200 Pisum sativum HOM05D003804 ORTHO05D004350 4.0e-77 292.4 296 53.0
Solyc05g055040.3 Solanum lycopersicum HOM05D003804 ORTHO05D004350 4.0e-77 292.4 295 52.5
Sopen05g033500 Solanum pennellii HOM05D003804 ORTHO05D004350 4.0e-77 292.4 295 52.5
ClCG11G010310 Citrullus lanatus HOM05D003804 ORTHO05D004350 5.3e-77 292.0 297 52.9
SEGI_36765 Sequoiadendron giganteum HOM05D003804 ORTHO05D004350 6.9e-77 291.6 295 50.2
CsaV3_2G010010 Cucumis sativus L. HOM05D003804 ORTHO05D004350 1.2e-76 290.8 298 52.3
Solyc04g009920.3 Solanum lycopersicum HOM05D003804 ORTHO05D004350 3.4e-76 289.3 295 52.9
PGSC0003DMG400023500 Solanum tuberosum HOM05D003804 ORTHO05D004350 3.4e-76 289.3 295 52.2
Gorai.013G188300 Gossypium raimondii HOM05D003804 ORTHO05D004350 4.5e-76 288.9 291 51.2
Oeu012230.1 Olea europaea HOM05D003804 ORTHO05D004350 4.5e-76 288.9 297 52.9
arahy.Tifrunner.gnm1.ann1.PMT11X Arachis hypogaea HOM05D003804 ORTHO05D004350 5.8e-76 288.5 298 50.7
Gohir.D13G172400 Gossypium hirsutum HOM05D003804 ORTHO05D004350 5.8e-76 288.5 291 50.9
SalBow3G4606 Salvia bowleyana HOM05D003804 ORTHO05D004350 1.3e-75 287.3 300 52.0
Sopen04g005060 Solanum pennellii HOM05D003804 ORTHO05D004350 1.3e-75 287.3 295 52.9
Cfa006383 Carpinus fangiana HOM05D003804 ORTHO05D004350 1.7e-75 287.0 295 51.5
PGSC0003DMG400011479 Solanum tuberosum HOM05D003804 ORTHO05D004350 2.2e-75 286.6 296 52.4
VMungo0540G0271 Vigna mungo HOM05D003804 ORTHO05D004350 2.9e-75 286.2 294 50.7
CAN.G1465.5 Capsicum annuum HOM05D003804 ORTHO05D004350 3.8e-75 285.8 295 52.5
Gohir.A13G161600 Gossypium hirsutum HOM05D003804 ORTHO05D004350 3.8e-75 285.8 291 50.9
Sabra13G0045400 Salix brachista HOM05D003804 ORTHO05D004350 3.8e-75 285.8 296 52.4
Ah.06g191850 Amaranthus hybridus HOM05D003804 ORTHO05D004350 6.5e-75 285.0 295 51.2
Glyma.19G247000 Glycine max HOM05D003804 ORTHO05D004350 6.5e-75 285.0 298 50.7
TWI60G0892 Tripterygium wilfordii HOM05D003804 ORTHO05D004350 6.5e-75 285.0 302 50.7
CiPaw.07G070900 Carya illinoinensis HOM05D003804 ORTHO05D004350 1.4e-74 283.9 295 52.9
Lj5g0014193 Lotus japonicus HOM05D003804 ORTHO05D004350 1.4e-74 283.9 296 51.4
Thecc.05G266900 Theobroma cacao HOM05D003804 ORTHO05D004350 1.4e-74 283.9 293 50.5
Nitab4.5_0001372g0080 Nicotiana tabacum HOM05D003804 ORTHO05D004350 1.9e-74 283.5 293 51.5
MSTRG.27378 Avicennia marina HOM05D003804 ORTHO05D004350 2.5e-74 283.1 297 52.5
Haze_04395 Corylus avellana HOM05D003804 ORTHO05D004350 2.5e-74 283.1 295 51.2
Glyma.03G249500 Glycine max HOM05D003804 ORTHO05D004350 2.5e-74 283.1 303 50.5
Peaxi162Scf00015g03111 Petunia axillaris HOM05D003804 ORTHO05D004350 2.5e-74 283.1 297 51.5
Peaxi162Scf00135g00416 Petunia axillaris HOM05D003804 ORTHO05D004350 2.5e-74 283.1 295 52.2
RcHm_v2.0_Chr3g0449231 Rosa chinensis HOM05D003804 ORTHO05D004350 2.5e-74 283.1 294 50.3
Sed0018274 Sechium edule HOM05D003804 ORTHO05D004350 2.5e-74 283.1 296 50.7
Sed0002107 Sechium edule HOM05D003804 ORTHO05D004350 3.2e-74 282.7 296 50.3
TWI32G1243 Tripterygium wilfordii HOM05D003804 ORTHO05D004350 3.2e-74 282.7 297 51.5
CAN.G1609.2 Capsicum annuum HOM05D003804 ORTHO05D004350 5.5e-74 282.0 295 52.2
Migut.F00805 Erythranthe guttata HOM05D003804 ORTHO05D004350 7.1e-74 281.6 297 51.2
CDE08G1101 Ceratophyllum demersum HOM05D003804 ORTHO05D004350 9.3e-74 281.2 296 52.4
Lalb_Chr06g0168201 Lupinus albus HOM05D003804 ORTHO05D004350 9.3e-74 281.2 301 50.5
Nitab4.5_0003768g0060 Nicotiana tabacum HOM05D003804 ORTHO05D004350 9.3e-74 281.2 303 51.5
TPR.G6978 Trifolium pratense HOM05D003804 ORTHO05D004350 2.7e-73 279.6 298 50.0
Cpa.g.sc51.6 Carica papaya HOM05D003804 ORTHO05D004350 6.0e-73 278.5 297 49.5
CDE02G2550 Ceratophyllum demersum HOM05D003804 ORTHO05D004350 6.0e-73 278.5 298 51.7
FAN05G4636 Fragaria x ananassa HOM05D003804 ORTHO05D004350 6.0e-73 278.5 295 50.5
Lj2A40T58 Lonicera japonica HOM05D003804 ORTHO05D004350 6.0e-73 278.5 318 46.9
TPR.G26623 Trifolium pratense HOM05D003804 ORTHO05D004350 1.0e-72 277.7 303 48.8
FAN09G3890 Fragaria x ananassa HOM05D003804 ORTHO05D004350 1.3e-72 277.3 296 50.3
Medtr1g080460 Medicago truncatula HOM05D003804 ORTHO05D004350 1.3e-72 277.3 297 49.8
SGA_v2.0_scaffold111G31426 Striga asiatica HOM05D003804 ORTHO05D004350 1.3e-72 277.3 299 50.2
THA.LOC104827281 Tarenaya hassleriana HOM05D003804 ORTHO05D004350 1.8e-72 276.9 296 49.0
Medtr7g115460 Medicago truncatula HOM05D003804 ORTHO05D004350 2.3e-72 276.6 297 51.5
Nitab4.5_0001268g0010 Nicotiana tabacum HOM05D003804 ORTHO05D004350 2.3e-72 276.6 295 50.2
Actinidia40003 Actinidia chinensis HOM05D003804 ORTHO05D004350 3.0e-72 276.2 272 52.2
FAN02G4114 Fragaria x ananassa HOM05D003804 ORTHO05D004350 3.0e-72 276.2 296 50.7
FAN14G2706 Fragaria x ananassa HOM05D003804 ORTHO05D004350 3.0e-72 276.2 296 51.0
FAN05G4825 Fragaria x ananassa HOM05D003804 ORTHO05D004350 3.9e-72 275.8 296 50.3
Manes.08G141400 Manihot esculenta HOM05D003804 ORTHO05D004350 3.9e-72 275.8 292 49.7
FvH4_6g01530 Fragaria vesca HOM05D003804 ORTHO05D004350 5.1e-72 275.4 296 51.0
FAN14G4672 Fragaria x ananassa HOM05D003804 ORTHO05D004350 5.1e-72 275.4 296 51.0
MD04G1232600 Malus domestica HOM05D003804 ORTHO05D004350 5.1e-72 275.4 297 49.5
MD12G1250100 Malus domestica HOM05D003804 ORTHO05D004350 1.1e-71 274.2 299 50.2
arahy.Tifrunner.gnm1.ann1.A208ZV Arachis hypogaea HOM05D003804 ORTHO05D004350 1.5e-71 273.9 321 47.0
AUR62040937 Chenopodium quinoa HOM05D003804 ORTHO05D004350 2.5e-71 273.1 295 49.5
AUR62004854 Chenopodium quinoa HOM05D003804 ORTHO05D004350 4.3e-71 272.3 294 48.6
Psat6g144120 Pisum sativum HOM05D003804 ORTHO05D004350 4.3e-71 272.3 294 48.3
EL10Ac4g09070 Beta vulgaris HOM05D003804 ORTHO05D004350 9.7e-71 271.2 295 50.2
Ca_10028_v3 Cicer arietinum L. HOM05D003804 ORTHO05D004350 9.7e-71 271.2 303 47.5
BcaC09g47809 Brassica carinata HOM05D003804 ORTHO05D004350 2.8e-70 269.6 295 46.4
Nitab4.5_0000687g0070 Nicotiana tabacum HOM05D006502 ORTHO05D004350 2.8e-70 269.6 323 46.7
BcaNung04819 Brassica carinata HOM05D003804 ORTHO05D004350 1.1e-69 267.7 294 48.6
Glyma.20G226800 Glycine max HOM05D003804 ORTHO05D004350 1.1e-69 267.7 305 48.2
VMungo0720G0320 Vigna mungo HOM05D003804 ORTHO05D004350 1.1e-69 267.7 303 47.5
Prupe.6G352300 Prunus persica HOM05D003804 ORTHO05D004350 1.8e-69 266.9 300 49.3
CARHR078510 Cardamine hirsuta HOM05D003804 ORTHO05D004350 2.4e-69 266.5 295 46.1
BraA01t04524Z Brassica rapa HOM05D003804 ORTHO05D004350 4.1e-69 265.8 299 45.8
Thhalv10020458m.g Eutrema salsugineum HOM05D003804 ORTHO05D004350 4.1e-69 265.8 294 48.3
Carub.0003s0354 Capsella rubella HOM05D003804 ORTHO05D004350 6.9e-69 265.0 294 48.6
arahy.Tifrunner.gnm1.ann1.Y4X76M Arachis hypogaea HOM05D003804 ORTHO05D004350 2.0e-68 263.5 320 45.6
A01p40890 Brassica napus HOM05D003804 ORTHO05D004350 2.6e-68 263.1 296 45.9
BNapus_Darmor_BZH_scaffold_78p00820 Brassica napus HOM05D003804 ORTHO05D004350 2.6e-68 263.1 296 45.9
Sc09g0004190 Simmondsia chinensis HOM05D003804 ORTHO05D004350 3.4e-68 262.7 266 53.0
BolC1t05753H Brassica oleracea HOM05D003804 ORTHO05D004350 4.5e-68 262.3 296 45.9
Phvul.007G116100 Phaseolus vulgaris HOM05D003804 ORTHO05D004350 7.7e-68 261.5 303 46.9
Gohir.A11G244900 Gossypium hirsutum HOM05D003804 ORTHO05D004350 1.0e-67 261.2 292 50.0
vmacro10357 Vaccinium macrocarpon HOM05D003804 ORTHO05D004350 1.0e-67 261.2 295 47.5
arahy.Tifrunner.gnm1.ann1.Y446PZ Arachis hypogaea HOM05D003804 ORTHO05D004350 2.2e-67 260.0 323 44.3
DCAR_023877 Daucus carota HOM05D003804 ORTHO05D004350 2.2e-67 260.0 295 49.2
Thhalv10013196m.g Eutrema salsugineum HOM05D003804 ORTHO05D004350 2.9e-67 259.6 293 49.8
CARHR194530 Cardamine hirsuta HOM05D003804 ORTHO05D004350 5.0e-67 258.8 294 49.0
Sp3g03220 Schrenkiella parvula HOM05D003804 ORTHO05D004350 6.5e-67 258.5 294 46.3
Aa31LG11G11120 Aethionema arabicum HOM05D003804 ORTHO05D004350 8.5e-67 258.1 296 48.3
AT5G18480 Arabidopsis thaliana HOM05D003804 ORTHO05D004350 1.9e-66 256.9 295 48.5
AL6G29740 Arabidopsis lyrata HOM05D003804 ORTHO05D004350 3.2e-66 256.1 295 48.1
Aa31LG5G14820 Aethionema arabicum HOM05D003804 ORTHO05D004350 7.2e-66 255.0 295 44.4
Sp6g25840 Schrenkiella parvula HOM05D003804 ORTHO05D004350 9.4e-66 254.6 295 49.2
BcaB01g04900 Brassica carinata HOM05D003804 ORTHO05D004350 2.3e-64 250.0 297 47.5
BcaC03g13603 Brassica carinata HOM05D003804 ORTHO05D004350 5.1e-64 248.8 295 47.1
Carub.0006s1676 Capsella rubella HOM05D003804 ORTHO05D004350 6.7e-64 248.4 295 48.1
BolC3t13517H Brassica oleracea HOM05D003804 ORTHO05D004350 1.1e-63 247.7 293 47.4
BcaB05g23331 Brassica carinata HOM05D003804 ORTHO05D004350 2.0e-63 246.9 293 46.8
A03p08890 Brassica napus HOM05D003804 ORTHO05D004350 2.5e-63 246.5 294 47.6
Oeu016029.1 Olea europaea HOM05D003804 ORTHO05D004350 5.7e-63 245.4 265 50.6
BolC2t06899H Brassica oleracea HOM05D003804 ORTHO05D004350 1.7e-62 243.8 296 47.0
C03p10370 Brassica napus HOM05D003804 ORTHO05D004350 2.8e-62 243.0 297 47.5
BraA03t10215Z Brassica rapa HOM05D003804 ORTHO05D004350 2.8e-62 243.0 297 47.5
Mapoly0009s0041 Marchantia polymorpha HOM05D003804 ORTHO05D004350 2.8e-62 243.0 304 46.7
A02p04940 Brassica napus HOM05D003804 ORTHO05D004350 6.3e-62 241.9 296 46.3
C02p09920 Brassica napus HOM05D003804 ORTHO05D004350 6.3e-62 241.9 296 46.3
BraA02t05453Z Brassica rapa HOM05D003804 ORTHO05D004350 1.8e-61 240.4 296 45.9
Ca_09447_v3 Cicer arietinum L. HOM05D003804 ORTHO05D004350 1.5e-60 237.3 267 47.2
Hund22153 Selenicereus undatus HOM05D003804 ORTHO05D004350 1.9e-58 230.3 297 44.4
SMO364G0002 Selaginella moellendorffii HOM05D003804 ORTHO05D004350 6.7e-56 221.9 293 43.7
TAR365G0644 Trochodendron aralioides HOM05D003804 ORTHO05D004350 2.4e-53 213.4 263 47.1
Pp3c1_6500 Physcomitrium patens HOM05D003804 ORTHO05D004350 4.1e-53 212.6 305 40.0
Pp3c2_32110 Physcomitrium patens HOM05D003804 ORTHO05D004350 3.5e-52 209.5 299 38.5
Lsat_1_v5_gn_2_107981 Lactuca sativa HOM05D003804 ORTHO05D004350 1.1e-47 194.5 253 43.5
CBR_g3073 Chara braunii HOM05D003804 ORTHO05D004350 6.8e-40 168.7 320 33.8
Eucgr.H04216 Eucalyptus grandis HOM05D003804 ORTHO05D004350 2.0e-39 167.2 148 54.7
MELO3C008614.2 Cucumis melo HOM05D003804 ORTHO05D004350 6.1e-33 145.6 109 64.2
Atru.chr2.1108 Acer truncatum HOM05D003804 ORTHO05D004350 5.2e-32 142.5 154 53.9
Atru.chr2.1109 Acer truncatum HOM05D003804 ORTHO05D004350 8.3e-30 135.2 138 52.2
Gorai.007G273500 Gossypium raimondii HOM05D003804 ORTHO05D004350 2.4e-29 133.7 292 35.6
unitig_32.g11828 Utricularia gibba HOM05D003804 ORTHO05D004350 7.0e-29 132.1 143 44.8
HanXRQChr01g0012051 Helianthus annuus HOM05D003804 ORTHO05D004350 1.2e-28 131.3 175 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2512 Anthoceros agrestis HOM05D003804 ORTHO05D004350 3.3e-18 96.7 50 74.0
Glyma.10G164501 Glycine max HOM05D003804 ORTHO05D004350 2.8e-17 93.6 116 46.6
HPP92_001761 Vanilla planifolia HOM05D003804 ORTHO05D004350 2.8e-17 93.6 165 35.2
Gohir.D11G254801 Gossypium hirsutum HOM05D003804 ORTHO05D004350 1.4e-16 91.3 145 42.1
TAR365G0429 Trochodendron aralioides HOM05D003804 ORTHO05D004350 4.4e-15 86.3 36 94.4
Cre10.g422450 Chlamydomonas reinhardtii HOM05D003804 ORTHO05D004350 1.2e-09 68.2 69 40.6


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