Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 2.4e-147 525.4 252 100.0
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 3.3e-35 152.9 257 35.8
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 3.6e-34 149.4 261 34.1
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 4.7e-34 149.1 252 33.7
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 1.0e-33 147.9 258 34.1
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.8e-33 147.1 239 37.2
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.8e-33 147.1 232 38.4
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.3e-33 146.7 269 33.1
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 2.3e-33 146.7 258 33.7
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.0e-32 143.7 246 35.4
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 4.4e-32 142.5 254 33.9
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 5.7e-32 142.1 258 33.3
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 9.8e-32 141.4 249 34.5
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.7e-31 140.6 234 34.2
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.7e-31 140.6 255 33.3
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 2.2e-31 140.2 271 32.8
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.2e-31 140.2 251 32.7
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 2.8e-31 139.8 255 35.3
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 4.9e-31 139.0 263 35.7
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 8.3e-31 138.3 259 32.0
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 1.1e-30 137.9 237 38.0
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.8e-30 137.1 249 34.1
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 2.4e-30 136.7 256 32.0
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.2e-30 136.3 242 35.1
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 3.2e-30 136.3 276 31.5
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 4.1e-30 136.0 239 35.6
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 4.1e-30 136.0 264 34.8
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 5.4e-30 135.6 261 33.7
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 9.2e-30 134.8 261 33.3
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.6e-29 134.0 258 34.5
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.6e-29 134.0 258 34.5
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 1.6e-29 134.0 261 33.3
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 1.6e-29 134.0 258 33.3
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.6e-29 134.0 251 34.7
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 2.0e-29 133.7 249 34.5
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 3.5e-29 132.9 234 34.2
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 4.5e-29 132.5 254 31.9
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 5.9e-29 132.1 269 32.0
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 7.8e-29 131.7 255 32.9
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 1.0e-28 131.3 249 30.9
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 2.9e-28 129.8 196 36.7
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 2.9e-28 129.8 266 32.0
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 6.6e-28 128.6 256 32.4
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 6.6e-28 128.6 261 33.0
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.1e-27 127.9 254 30.3
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.9e-27 127.1 261 30.3
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 3.3e-27 126.3 257 31.1
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 4.3e-27 125.9 269 29.4
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 9.5e-27 124.8 261 32.6
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.2e-26 124.4 288 29.5
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.2e-26 124.4 268 32.5
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 2.1e-26 123.6 263 33.1
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 2.8e-26 123.2 257 31.5
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 4.7e-26 122.5 258 34.5
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 1.8e-25 120.6 282 29.1
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 2.3e-25 120.2 258 32.6
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 2.3e-25 120.2 212 31.6
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 1.5e-24 117.5 240 32.1
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 5.8e-24 115.5 261 32.2
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 7.5e-24 115.2 258 29.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.3e-23 114.4 210 35.2
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 2.9e-23 113.2 261 31.8
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 6.4e-23 112.1 261 31.8
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 2.4e-22 110.2 264 31.1
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.4e-22 110.2 334 25.4
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 1.0e-20 104.8 204 32.8
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.3e-20 103.6 151 40.4
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.2e-18 97.8 165 35.8
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.5e-16 90.9 144 36.8
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 4.4e-16 89.4 134 35.1
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 2.2e-15 87.0 170 33.5
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 9.2e-14 81.6 125 39.2
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.7e-12 77.4 148 35.1
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.2e-10 71.2 163 33.1
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 1.7e-07 60.8 68 44.1


User provided reference genes

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