Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 0.0e+00 1238.0 613 100.0
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 2.8e-306 1054.7 595 87.4
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 4.9e-303 1043.9 595 86.2
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 9.7e-267 923.3 585 75.6
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 4.8e-266 921.0 553 78.7
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.1e-265 919.8 560 79.8
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 3.1e-265 918.3 554 77.6
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 4.1e-265 917.9 551 78.2
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 6.9e-265 917.1 547 80.1
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 9.0e-265 916.8 543 80.1
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 9.0e-265 916.8 571 77.4
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.2e-264 916.4 547 79.0
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 1.5e-264 916.0 568 78.0
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-264 916.0 564 77.0
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.5e-264 916.0 564 77.0
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.0e-264 915.6 546 78.9
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 3.4e-264 914.8 547 78.8
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 4.5e-264 914.4 575 76.3
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 4.5e-264 914.4 553 77.9
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 5.9e-264 914.1 569 78.0
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 5.9e-264 914.1 583 75.3
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 7.7e-264 913.7 582 76.6
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 2.2e-263 912.1 547 78.8
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.9e-263 911.8 553 77.9
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 5.0e-263 911.0 593 74.7
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.9e-262 909.1 557 78.8
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.9e-262 909.1 579 76.2
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 9.4e-262 906.7 568 77.8
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 1.2e-261 906.4 582 74.9
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.2e-261 906.4 568 76.2
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 3.6e-261 904.8 565 77.5
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.0e-260 903.3 570 76.0
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 1.4e-260 902.9 619 72.2
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.3e-260 902.1 557 78.5
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 3.0e-260 901.7 577 76.8
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 3.9e-260 901.4 586 75.3
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 3.9e-260 901.4 546 79.7
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 3.9e-260 901.4 560 77.9
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 5.1e-260 901.0 580 75.2
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.1e-259 899.8 560 77.9
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.1e-259 899.8 591 74.1
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 7.4e-259 897.1 584 74.0
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 9.7e-259 896.7 557 76.7
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 3.7e-258 894.8 546 78.6
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.1e-257 893.3 548 76.6
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.1e-257 893.3 553 76.7
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 1.1e-257 893.3 555 77.1
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 1.1e-257 893.3 602 73.1
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 1.4e-257 892.9 586 73.9
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 1.4e-257 892.9 550 77.1
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.4e-257 892.1 610 71.6
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 5.3e-257 891.0 610 71.6
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.2e-256 889.8 584 74.1
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.5e-256 889.4 572 74.8
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 1.5e-256 889.4 563 75.8
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 2.0e-256 889.0 582 73.2
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 2.0e-256 889.0 572 74.0
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 2.6e-256 888.6 575 75.3
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 3.4e-256 888.3 563 75.3
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 3.4e-256 888.3 558 75.1
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 5.9e-256 887.5 558 75.8
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 7.7e-256 887.1 583 73.9
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 7.7e-256 887.1 573 74.2
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.3e-255 886.3 562 75.6
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.7e-255 885.9 610 71.3
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 2.9e-255 885.2 573 73.6
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 2.9e-255 885.2 564 75.2
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 5.0e-255 884.4 564 75.0
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 6.5e-255 884.0 557 76.1
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.9e-254 882.5 582 74.1
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 3.2e-254 881.7 581 73.5
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 4.2e-254 881.3 586 73.4
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 9.4e-254 880.2 571 74.1
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 9.4e-254 880.2 583 74.3
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.1e-253 879.0 567 73.5
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 3.6e-253 878.2 574 73.7
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 3.6e-253 878.2 549 74.7
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 4.7e-253 877.9 556 75.5
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 4.7e-253 877.9 585 73.2
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 6.1e-253 877.5 592 73.3
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 7.9e-253 877.1 559 76.2
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.0e-252 876.7 557 75.8
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 1.4e-252 876.3 549 76.0
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.4e-252 876.3 567 73.5
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 2.3e-252 875.5 551 75.9
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 3.0e-252 875.2 549 76.0
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 3.0e-252 875.2 549 76.0
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 3.0e-252 875.2 594 72.6
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 3.0e-252 875.2 579 72.5
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 3.0e-252 875.2 592 73.0
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 3.9e-252 874.8 568 73.9
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 3.9e-252 874.8 605 72.6
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 5.1e-252 874.4 549 75.6
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 6.7e-252 874.0 549 75.6
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 6.7e-252 874.0 565 74.9
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 8.8e-252 873.6 554 75.1
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.1e-251 873.2 590 73.7
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.5e-251 872.8 588 72.1
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.5e-251 872.8 523 78.8
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 2.6e-251 872.1 556 75.2
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 3.3e-251 871.7 549 75.6
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 3.3e-251 871.7 580 74.0
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 4.4e-251 871.3 554 75.1
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.7e-251 870.9 556 75.2
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 5.7e-251 870.9 594 72.2
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 1.3e-250 869.8 582 72.3
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 1.7e-250 869.4 582 72.7
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 2.2e-250 869.0 549 75.4
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 4.8e-250 867.8 556 75.2
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 9.1e-249 863.6 654 65.0
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 2.0e-248 862.4 535 76.3
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.5e-248 861.7 591 73.1
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 2.5e-246 855.5 551 75.3
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 3.2e-246 855.1 584 71.9
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.1e-243 846.7 585 73.8
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.4e-241 839.7 499 81.0
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 3.5e-240 835.1 564 73.9
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 4.4e-235 818.1 625 66.4
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 4.8e-234 814.7 570 70.5
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 5.9e-232 807.7 560 68.8
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 2.5e-230 802.4 535 73.8
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 2.7e-229 798.9 554 68.8
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.5e-227 793.1 851 51.7
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.5e-222 775.8 507 75.1
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 4.2e-222 775.0 882 48.4
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 3.7e-210 735.3 575 64.2
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.2e-203 713.8 564 63.7
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 8.6e-199 697.6 546 63.6
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 2.8e-197 692.6 511 67.7
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 8.9e-196 687.6 379 86.0
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.0e-191 674.1 563 57.7
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.3e-181 640.6 448 67.9
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 1.1e-166 590.9 356 81.2
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 9.6e-166 587.8 412 73.3
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 1.5e-155 553.9 586 49.3
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 2.3e-151 540.0 407 67.3
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.0e-135 488.0 297 78.8
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.2e-131 474.6 422 62.8
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 1.1e-116 424.9 332 60.5
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.3e-98 364.8 635 38.0
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 3.3e-97 360.1 408 43.6
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.1e-96 357.5 545 38.5
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 4.1e-84 316.6 188 80.9
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 2.1e-80 304.3 213 66.2
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 9.2e-76 288.9 209 70.3
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 7.8e-75 285.8 375 41.1
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 5.8e-70 269.6 202 62.9
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 8.7e-66 255.8 367 37.1
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.7e-66 255.8 212 59.0
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.7e-66 255.8 212 59.0
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 2.7e-59 234.2 160 67.5
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 8.7e-58 229.2 159 66.0
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 3.0e-50 204.1 226 51.8
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.7e-43 181.0 89 95.5
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.2e-27 129.0 72 83.3
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 8.8e-26 122.9 69 75.4
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 8.8e-26 122.9 69 75.4
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 3.1e-23 114.4 122 51.6
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 8.2e-16 89.7 84 56.0
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 3.5e-14 84.3 82 57.3
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 3.2e-12 77.8 49 67.3
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 3.2e-12 77.8 49 67.3
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 9.4e-12 76.3 48 66.7
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 2.3e-10 71.6 43 72.1
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 2.2e-08 65.1 53 56.6


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