Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 3.9e-111 404.8 206 100.0
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.1e-65 253.8 174 79.3
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.2e-59 233.8 148 83.8
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 1.2e-56 223.8 170 71.2
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 2.7e-56 222.6 184 65.2
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 6.7e-55 218.0 147 74.1
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.5e-54 216.9 153 72.5
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 2.6e-54 216.1 159 70.4
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.7e-54 214.9 180 65.6
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 7.4e-54 214.5 131 79.4
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 7.4e-54 214.5 131 79.4
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 7.4e-54 214.5 166 68.7
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 1.3e-53 213.8 131 79.4
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 1.7e-53 213.4 183 61.7
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 2.2e-53 213.0 154 70.1
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 2.2e-53 213.0 155 69.7
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 3.7e-53 212.2 132 79.5
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 6.3e-53 211.5 158 69.0
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 8.2e-53 211.1 163 69.3
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 8.2e-53 211.1 163 69.3
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 8.2e-53 211.1 135 74.8
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 8.2e-53 211.1 135 75.6
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.1e-52 210.7 150 71.3
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.1e-52 210.7 147 72.8
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.1e-52 210.7 156 68.6
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 1.4e-52 210.3 149 71.8
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.4e-52 210.3 144 72.2
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 1.4e-52 210.3 139 74.1
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 1.4e-52 210.3 172 65.1
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 1.4e-52 210.3 190 61.6
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 1.4e-52 210.3 153 68.6
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.8e-52 209.9 148 70.3
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 1.8e-52 209.9 131 77.9
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.4e-52 209.5 147 72.1
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 2.4e-52 209.5 150 70.0
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 4.1e-52 208.8 147 71.4
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 5.3e-52 208.4 148 70.9
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 5.3e-52 208.4 162 67.3
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 5.3e-52 208.4 138 76.1
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 7.0e-52 208.0 151 69.5
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 7.0e-52 208.0 183 60.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 7.0e-52 208.0 137 73.0
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 9.1e-52 207.6 131 76.3
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 9.1e-52 207.6 144 73.6
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 9.1e-52 207.6 135 75.6
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.2e-51 207.2 131 77.9
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.2e-51 207.2 131 76.3
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.6e-51 206.8 130 78.5
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 2.6e-51 206.1 135 75.6
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.5e-51 205.7 200 57.0
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 3.5e-51 205.7 153 68.0
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 4.5e-51 205.3 201 60.2
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 7.7e-51 204.5 178 60.7
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 7.7e-51 204.5 135 72.6
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.0e-50 204.1 135 72.6
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.0e-50 204.1 157 66.9
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.0e-50 204.1 148 68.9
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 1.3e-50 203.8 131 77.1
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.7e-50 203.4 200 57.0
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 2.9e-50 202.6 135 74.1
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.0e-50 201.8 200 57.0
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 5.0e-50 201.8 157 66.9
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 8.5e-50 201.1 148 68.9
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.1e-49 200.7 148 68.2
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.1e-49 200.7 148 68.2
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 1.9e-49 199.9 131 73.3
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.9e-49 199.9 135 74.1
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 1.9e-49 199.9 139 70.5
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 4.2e-49 198.7 166 62.0
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 4.2e-49 198.7 178 59.6
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 5.5e-49 198.4 178 59.0
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 5.5e-49 198.4 178 59.0
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.5e-49 198.4 134 73.1
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 5.5e-49 198.4 168 61.3
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 7.2e-49 198.0 190 57.9
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 7.2e-49 198.0 178 59.6
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 9.4e-49 197.6 178 59.6
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.2e-48 197.2 166 61.4
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 1.2e-48 197.2 192 56.8
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.6e-48 196.8 167 62.3
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.6e-48 196.8 132 76.5
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 2.1e-48 196.4 167 62.9
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 2.1e-48 196.4 137 72.3
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 2.7e-48 196.1 165 62.4
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 2.7e-48 196.1 142 69.7
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 2.7e-48 196.1 142 69.0
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 3.6e-48 195.7 139 71.2
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 4.7e-48 195.3 178 59.0
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 6.1e-48 194.9 184 57.6
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 6.1e-48 194.9 165 61.8
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 8.0e-48 194.5 129 72.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.8e-47 193.4 195 55.4
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 6.7e-47 191.4 200 55.5
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.5e-46 190.3 182 57.7
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.5e-46 190.3 152 65.8
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 2.0e-46 189.9 194 54.1
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.0e-46 189.9 185 55.7
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 5.7e-46 188.3 156 62.2
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.8e-45 186.0 157 63.1
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.7e-45 185.7 158 62.7
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 4.8e-45 185.3 116 75.9
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 8.2e-45 184.5 135 67.4
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.4e-44 183.7 125 71.2
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.4e-44 183.0 142 66.9
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 3.1e-44 182.6 120 74.2
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 9.1e-44 181.0 113 77.0
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 2.0e-43 179.9 138 65.9
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 2.7e-43 179.5 144 66.0
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 3.5e-43 179.1 140 65.7
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.3e-42 177.2 260 43.1
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 2.2e-42 176.4 132 63.6
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 3.8e-42 175.6 145 63.4
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 8.5e-42 174.5 110 75.5
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.1e-41 174.1 149 63.1
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.9e-41 173.3 174 53.4
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.9e-41 173.3 131 67.2
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 3.2e-41 172.6 159 57.9
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.2e-41 172.6 131 61.8
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.6e-40 170.2 117 70.9
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.7e-40 168.7 131 65.6
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.4e-39 167.2 149 60.4
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 2.6e-38 162.9 141 59.6
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 2.2e-37 159.8 109 70.6
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.8e-37 159.5 131 63.4
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 4.8e-37 158.7 134 61.2
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.8e-37 158.7 131 60.3
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.8e-36 156.8 144 59.7
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 3.1e-36 156.0 140 57.9
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 3.5e-35 152.5 154 57.8
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 3.5e-35 152.5 131 60.3
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 4.5e-35 152.1 116 65.5
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.9e-34 149.4 106 68.9
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 8.6e-34 147.9 134 57.5
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.5e-33 146.4 171 52.6
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 8.0e-32 141.4 88 76.1
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.4e-31 140.6 102 69.6
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.8e-31 140.2 106 65.1
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.8e-31 140.2 137 54.7
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 5.2e-31 138.7 131 57.3
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 8.9e-31 137.9 84 76.2
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-30 137.5 106 66.0
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 2.0e-30 136.7 105 65.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 7.0e-28 128.3 139 48.9
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 8.6e-26 121.3 159 45.9
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 3.0e-23 112.8 135 46.7
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.1e-17 94.4 168 37.5
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 9.5e-17 91.3 62 72.6
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 1.2e-16 90.9 88 54.5
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 2.3e-15 86.7 116 39.7
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.1e-09 67.8 54 61.1
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.2e-08 64.3 64 53.1


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