Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 2.6e-104 382.1 198 100.0
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 2.1e-77 292.7 232 69.8
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 9.0e-49 197.6 198 53.5
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.6e-48 196.1 188 55.9
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 3.4e-48 195.7 200 56.0
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.3e-47 193.7 179 56.4
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.3e-47 193.7 191 53.4
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 1.3e-47 193.7 183 56.3
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.7e-47 193.4 185 55.7
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 8.5e-47 191.0 195 53.3
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.1e-46 190.7 193 52.8
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 1.4e-46 190.3 176 59.1
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 3.2e-46 189.1 178 57.3
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 3.2e-46 189.1 201 51.7
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 3.2e-46 189.1 194 53.1
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 4.2e-46 188.7 191 50.3
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 5.5e-46 188.3 184 53.3
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 7.2e-46 188.0 184 55.4
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 1.2e-45 187.2 199 53.3
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.2e-45 187.2 174 57.5
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.6e-45 186.8 181 55.2
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 1.6e-45 186.8 197 51.8
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 2.7e-45 186.0 177 54.8
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.7e-45 186.0 196 53.1
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 3.6e-45 185.7 196 53.1
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 4.6e-45 185.3 185 51.9
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 6.1e-45 184.9 176 55.7
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 6.1e-45 184.9 190 54.7
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.1e-45 184.9 179 54.7
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 7.9e-45 184.5 184 56.5
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 7.9e-45 184.5 176 55.1
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 7.9e-45 184.5 167 57.5
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.0e-44 184.1 185 54.1
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.0e-44 184.1 199 52.3
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.4e-44 183.7 181 54.1
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 1.8e-44 183.3 179 54.2
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 1.8e-44 183.3 175 54.9
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 2.3e-44 183.0 183 53.0
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 3.0e-44 182.6 185 54.1
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 3.9e-44 182.2 203 50.7
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 8.8e-44 181.0 201 49.8
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.5e-43 180.3 199 50.3
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 1.5e-43 180.3 194 48.5
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 2.0e-43 179.9 183 53.0
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 2.5e-43 179.5 175 53.7
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 4.3e-43 178.7 191 51.8
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.3e-43 178.7 183 52.5
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.3e-42 177.2 195 48.2
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 1.3e-42 177.2 197 53.3
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.7e-42 176.8 195 48.2
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 2.2e-42 176.4 195 48.2
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 2.8e-42 176.0 171 54.4
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.8e-42 176.0 196 52.0
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 3.7e-42 175.6 192 50.0
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 6.3e-42 174.9 185 52.4
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 1.1e-41 174.1 197 51.3
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 1.4e-41 173.7 199 49.2
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.8e-41 173.3 193 50.8
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 3.1e-41 172.6 190 52.1
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 4.1e-41 172.2 223 47.1
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 5.3e-41 171.8 186 48.9
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 5.3e-41 171.8 186 50.5
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 6.9e-41 171.4 188 49.5
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.2e-40 170.6 184 49.5
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.6e-40 169.5 173 51.4
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 3.4e-40 169.1 188 48.4
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 5.9e-40 168.3 159 53.5
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 7.7e-40 167.9 181 51.9
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.2e-39 166.4 183 53.0
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 2.2e-39 166.4 230 42.6
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 3.8e-39 165.6 186 49.5
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.5e-39 164.9 206 48.1
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 6.5e-39 164.9 169 51.5
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 8.5e-39 164.5 182 51.1
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 8.5e-39 164.5 167 50.9
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.4e-38 163.7 217 45.2
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 2.5e-38 162.9 193 49.2
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.5e-38 162.9 176 50.0
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 2.5e-38 162.9 172 51.2
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 3.2e-38 162.5 184 47.3
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 4.2e-38 162.2 182 52.2
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 5.5e-38 161.8 183 49.7
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 5.5e-38 161.8 171 53.8
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.6e-37 160.2 176 48.3
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 2.7e-37 159.5 199 44.7
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.4e-36 157.1 182 51.1
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.5e-35 153.7 193 49.2
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 4.4e-35 152.1 193 47.7
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 7.4e-35 151.4 193 47.2
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 1.3e-34 150.6 183 49.7
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.3e-34 150.6 193 47.2
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 2.2e-34 149.8 163 50.9
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 8.2e-34 147.9 171 51.5
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.1e-33 147.5 194 47.4
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.4e-33 147.1 197 47.2
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 2.4e-33 146.4 171 51.5
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 2.4e-33 146.4 194 46.9
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 4.1e-33 145.6 171 50.9
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 4.1e-33 145.6 171 50.9
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 5.3e-33 145.2 171 50.9
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 5.3e-33 145.2 171 50.9
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 2.6e-32 142.9 186 44.6
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 2.2e-31 139.8 177 46.3
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 3.2e-30 136.0 161 49.7
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 8.0e-29 131.3 167 46.7
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 6.7e-28 128.3 137 54.7
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 2.8e-26 122.9 121 52.9
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 5.0e-23 112.1 124 49.2
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.2e-21 107.5 103 57.3
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 2.1e-21 106.7 91 60.4
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 1.0e-20 104.4 179 41.9
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.4e-17 93.2 194 37.1
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 2.0e-16 90.1 179 33.5
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 3.0e-12 76.3 104 45.2
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 8.3e-10 68.2 121 42.1


User provided reference genes

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