Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0317300 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.8e-289 998.4 468 100.0
Os04g0329500 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.4e-286 988.8 468 99.1
Os04g0316800 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.8e-226 787.7 443 84.2
Os11g0594600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 6.1e-88 328.9 410 43.7
Zm00001eb167580 Zea mays HOM05D011330 ORTHO05D013903 1.4e-87 327.8 407 44.2
Os11g0595100 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.1e-73 281.6 414 40.1
Zm00001eb114820 Zea mays HOM05D011330 ORTHO05D013903 1.9e-73 280.8 352 44.9
Os11g0594500 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 5.3e-47 193.0 426 34.3
Os08g0293200 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.8e-40 169.9 231 46.3
Os06g0148600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D000074 2.5e-28 131.0 425 28.2
Os06g0148700 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 7.2e-28 129.4 336 29.5
Os04g0329650 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 3.5e-27 127.1 67 86.6
Os01g0673300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 7.7e-22 109.4 424 27.6
Peaxi162Scf00111g00720 Petunia axillaris HOM05D000151 ORTHO05D000074 3.8e-21 107.1 426 27.5
Os12g0585300 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.6e-19 100.1 446 26.5
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.6e-19 100.1 384 26.6
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-18 99.0 384 26.6
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 7.4e-17 92.8 424 25.7
Os07g0499900 Oryza sativa ssp. japonica HOM05D033386 ORTHO05D037243 4.1e-15 87.0 252 28.2
Zm00001eb167880 Zea mays HOM05D010462 ORTHO05D012694 4.1e-15 87.0 450 24.7
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 5.3e-15 86.7 432 24.1
Medtr3g114970 Medicago truncatula HOM05D000151 ORTHO05D000074 1.5e-14 85.1 406 25.4
Zm00001eb236630 Zea mays HOM05D010462 ORTHO05D012694 1.5e-14 85.1 445 24.0
Thecc.03G224900 Theobroma cacao HOM05D000151 ORTHO05D000074 2.0e-14 84.7 383 25.1
Oeu030066.1 Olea europaea HOM05D000151 ORTHO05D000074 8.5e-13 79.3 421 23.8
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 4.2e-12 77.0 412 24.3
Os01g0660700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 3.6e-11 73.9 378 26.5
Duzib248G1625 Durio zibethinus HOM05D007346 ORTHO05D009044 6.1e-11 73.2 427 21.5
Peaxi162Scf01221g00008 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-10 71.6 426 22.5
Os06g0148900 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 3.9e-10 70.5 161 34.2
Oeu016486.1 Olea europaea HOM05D000151 ORTHO05D000074 4.4e-09 67.0 361 24.4
Os12g0592500 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 3.7e-08 63.9 88 40.9
Prupe.6G183700 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-07 62.0 384 22.4
Os05g0539300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 7.0e-07 59.7 390 21.8


User provided reference genes

Program Settings