Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 2.2e-186 655.6 363 100.0
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 1.6e-184 649.4 363 95.6
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 4.0e-79 299.3 367 47.4
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 5.1e-74 282.3 356 44.9
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 2.2e-72 276.9 357 48.7
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 6.3e-72 275.4 355 48.7
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 3.1e-71 273.1 366 47.0
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 5.9e-70 268.9 363 45.5
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 1.0e-69 268.1 367 45.2
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 2.5e-68 263.5 341 47.8
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 5.5e-68 262.3 352 44.0
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.6e-67 259.6 356 46.3
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 4.5e-62 242.7 357 44.8
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 1.3e-48 198.0 344 36.9
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.2e-48 197.2 352 38.4
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 3.8e-45 186.4 355 34.6
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 2.5e-44 183.7 355 33.8
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.8e-42 177.6 354 34.5
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 4.0e-42 176.4 354 34.2
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 8.8e-42 175.3 354 33.9
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 7.5e-41 172.2 354 33.9
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 1.7e-40 171.0 350 31.1
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.2e-37 160.6 352 35.8
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 1.9e-36 157.5 352 32.7
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 8.8e-34 148.7 351 31.6
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 1.7e-32 144.4 348 29.9
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 2.8e-32 143.7 277 33.6
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 8.3e-32 142.1 353 32.9
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 9.5e-28 128.6 256 34.0
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 4.4e-25 119.8 370 28.4
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 2.4e-23 114.0 386 25.9
AUR62031148 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.2e-15 87.0 133 44.4
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.5e-12 77.4 288 26.4
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 6.8e-10 69.3 179 35.2
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 1.5e-09 68.2 150 29.3
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 8.3e-08 62.4 125 37.6
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 1.1e-07 62.0 94 39.4
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 5.4e-07 59.7 151 29.1
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.1e-06 57.8 315 23.8


User provided reference genes

Program Settings