Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 7.1e-193 677.2 363 100.0
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 5.1e-183 644.4 363 95.6
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 4.9e-85 318.9 367 49.9
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 5.3e-79 298.9 356 46.9
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 1.6e-75 287.3 367 47.4
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 2.2e-72 276.9 363 45.7
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 2.8e-72 276.6 352 45.7
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.7e-72 276.2 355 46.5
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 8.2e-72 275.0 357 45.9
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.4e-71 274.2 366 45.1
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 9.4e-68 261.5 341 44.9
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.7e-67 260.0 356 43.5
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 7.7e-62 241.9 357 42.3
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 2.8e-48 196.8 344 37.2
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 7.0e-47 192.2 352 36.4
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 1.0e-45 188.3 355 35.5
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 1.9e-44 184.1 355 34.4
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 4.7e-43 179.5 353 34.8
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 1.8e-42 177.6 354 35.6
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.3e-42 177.2 353 34.3
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 3.3e-41 173.3 354 35.0
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 9.7e-41 171.8 350 32.0
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 1.1e-36 158.3 352 33.2
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.2e-35 154.8 352 32.1
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 1.2e-33 148.3 280 35.0
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 3.4e-33 146.7 351 32.2
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 1.4e-31 141.4 348 30.5
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 7.0e-31 139.0 352 30.4
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 3.3e-28 130.2 254 34.3
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 2.3e-26 124.0 370 28.9
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 2.6e-25 120.6 386 26.9
AUR62031148 Chenopodium quinoa HOM05D008906 ORTHO05D010752 7.5e-17 92.4 140 45.0
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.0e-13 80.5 402 25.4
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 1.9e-12 77.8 150 32.7
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 1.7e-08 64.7 125 40.0
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 2.2e-08 64.3 179 27.9
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 8.3e-08 62.4 94 39.4
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 1.9e-07 61.2 151 30.5


User provided reference genes

Program Settings