Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 8.4e-100 367.5 251 100.0
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 6.3e-55 218.4 239 69.5
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 5.0e-52 208.8 239 70.7
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 1.2e-50 204.1 239 66.9
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.2e-50 204.1 239 70.3
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.6e-50 203.8 234 68.8
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.4e-49 200.7 235 67.7
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.3e-49 199.9 239 64.4
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 3.0e-49 199.5 236 69.5
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.1e-48 197.6 237 70.9
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 2.8e-47 193.0 239 68.6
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 6.3e-47 191.8 239 65.7
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 6.3e-47 191.8 239 68.6
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 8.2e-47 191.4 239 69.9
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 2.4e-46 189.9 236 70.8
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 2.4e-46 189.9 239 64.4
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 2.4e-46 189.9 240 65.4
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 3.1e-46 189.5 236 70.3
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 5.3e-46 188.7 239 63.6
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 9.1e-46 188.0 236 63.1
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 2.6e-45 186.4 239 69.0
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.5e-45 186.0 239 63.6
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 4.5e-45 185.7 236 67.4
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 5.9e-45 185.3 238 66.8
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 7.7e-45 184.9 238 61.8
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.7e-44 183.7 239 67.8
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 6.5e-44 181.8 240 67.5
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.1e-43 181.0 234 63.2
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 1.6e-42 177.2 235 66.8
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.1e-42 176.8 236 64.8
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.4e-41 174.1 253 59.7
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.2e-41 172.2 242 64.5
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 5.2e-41 172.2 238 66.0
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 6.7e-41 171.8 239 65.7
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 7.5e-40 168.3 240 57.9
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.7e-39 167.2 236 64.8
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.7e-39 166.0 239 64.4
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.7e-39 166.0 244 63.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 3.7e-39 166.0 281 54.1
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.8e-39 165.6 239 65.3
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.1e-38 164.5 228 64.0
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 1.8e-38 163.7 238 64.7
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 9.1e-38 161.4 240 63.8
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.7e-37 159.8 238 59.2
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 4.5e-37 159.1 138 60.9
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.3e-36 157.5 239 64.4
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.3e-36 157.5 239 62.3
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 5.0e-36 155.6 137 59.9
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 6.5e-36 155.2 237 58.6
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.1e-35 154.5 239 61.9
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.5e-35 154.1 314 35.4
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 4.2e-35 152.5 238 60.5
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 3.6e-34 149.4 236 58.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 8.0e-34 148.3 239 61.9
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.4e-33 147.5 250 59.2
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.4e-33 147.5 136 57.4
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 5.2e-33 145.6 236 61.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 5.2e-33 145.6 239 39.7
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 5.2e-33 145.6 239 61.9
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 8.8e-33 144.8 239 60.7
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 8.8e-33 144.8 250 58.8
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.0e-32 143.7 236 61.4
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.3e-31 141.0 250 58.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.3e-31 141.0 250 58.0
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 3.7e-31 139.4 239 59.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 3.7e-31 139.4 239 58.2
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 4.8e-31 139.0 136 55.9
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 3.1e-30 136.3 252 46.0
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 9.1e-30 134.8 239 58.6
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 1.6e-29 134.0 239 58.2
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 3.8e-28 129.4 239 58.2
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 6.5e-28 128.6 295 31.9
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 1.9e-27 127.1 242 57.0
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 2.5e-27 126.7 136 50.0
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.8e-23 113.2 239 55.6
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.4e-22 110.2 187 66.8
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-21 107.8 187 66.3
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 7.7e-21 105.1 240 52.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.3e-19 99.8 172 57.0
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 4.3e-19 99.4 86 55.8
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.1e-18 97.1 81 63.0
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.0e-17 93.2 144 72.9
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 8.3e-15 85.1 49 85.7
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.0e-12 78.2 239 49.8
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 7.3e-11 72.0 48 70.8
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 7.3e-11 72.0 239 49.0
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 7.3e-11 72.0 51 66.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 7.3e-11 72.0 155 67.1
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.2e-10 71.2 48 70.8
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.6e-10 70.9 68 61.8
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.8e-10 70.1 50 66.0
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 3.6e-10 69.7 48 70.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 4.7e-10 69.3 45 75.6
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 1.0e-09 68.2 48 64.6
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.0e-09 68.2 45 68.9
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 1.8e-09 67.4 45 68.9
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 3.1e-09 66.6 68 57.4
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 6.8e-09 65.5 48 62.5
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 8.9e-09 65.1 49 59.2
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 9.8e-08 61.6 48 60.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.9e-06 57.4 44 59.1
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 3.2e-06 56.6 43 67.4


User provided reference genes

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