Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0136700 Oryza sativa ssp. japonica HOM05D009556 ORTHO05D011767 4.0e-114 414.8 221 100.0
MBI07_g19552_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 3.4e-52 209.1 201 59.2
HPP92_002443 Vanilla planifolia HOM05D009556 ORTHO05D011767 4.4e-52 208.8 157 68.8
Aqoxy2G03847 Aquilegia oxysepala HOM05D009556 ORTHO05D011767 3.1e-50 202.6 155 67.7
ATR0088G015 Amborella trichopoda HOM05D009556 ORTHO05D011767 1.2e-49 200.7 169 62.7
SEGI_37799 Sequoiadendron giganteum HOM05D009556 ORTHO05D011767 1.6e-46 190.3 169 59.8
Os02g0818000 Oryza sativa ssp. japonica HOM05D009556 ORTHO05D011767 2.0e-44 183.3 167 58.1
Zm00001eb191350 Zea mays HOM05D009556 ORTHO05D011767 2.2e-43 179.9 206 51.5
AagrBONN_evm.TU.Sc2ySwM_117.1671 Anthoceros agrestis HOM05D009556 ORTHO05D011767 1.1e-42 177.6 226 48.7
Nn1g03118 Nelumbo nucifera HOM05D009556 ORTHO05D011767 4.1e-42 175.6 185 55.1
SEGI_33600 Sequoiadendron giganteum HOM05D009556 ORTHO05D011767 4.1e-42 175.6 157 59.9
CDE11G0542 Ceratophyllum demersum HOM05D009556 ORTHO05D011767 2.9e-40 169.5 158 51.3
CDE02G2621 Ceratophyllum demersum HOM05D009556 ORTHO05D011767 4.3e-39 165.6 158 50.6
Zm00001eb088850 Zea mays HOM05D009556 ORTHO05D011767 2.8e-38 162.9 123 75.6
Pp3c15_7070 Physcomitrium patens HOM05D004347 ORTHO05D005270 2.3e-37 159.8 153 53.6
Pp3c20_22760 Physcomitrium patens HOM05D009556 ORTHO05D011767 8.9e-37 157.9 189 48.1
Mapoly0036s0073 Marchantia polymorpha HOM05D009556 ORTHO05D011767 3.4e-36 156.0 182 46.7
Pp3c9_2740 Physcomitrium patens HOM05D004347 ORTHO05D005270 5.7e-36 155.2 150 53.3
Pp3c9_2745 Physcomitrium patens HOM05D004347 ORTHO05D005270 5.7e-36 155.2 150 53.3
TAR362G1180 Trochodendron aralioides HOM05D009556 ORTHO05D011767 8.3e-35 151.4 154 53.2
SMO134G0271 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 3.5e-33 146.0 175 48.6
SMO364G0523 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 3.6e-30 136.0 138 52.9
CBR_g22369 Chara braunii HOM05D009556 ORTHO05D011767 3.2e-26 122.9 203 36.5
MBI10_g09188_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 2.7e-25 119.8 114 57.0
Nn1g03115 Nelumbo nucifera HOM05D009556 ORTHO05D011767 1.6e-22 110.5 141 47.5
Nn1g03117 Nelumbo nucifera HOM05D009556 ORTHO05D011767 6.2e-22 108.6 138 47.8
MBI10_g09184_MAGBIO Magnolia biondii HOM05D009556 ORTHO05D011767 1.6e-17 94.0 60 78.3
SMO285G0006 Selaginella moellendorffii HOM05D009556 ORTHO05D011767 5.1e-16 89.0 82 53.7
CBR_g23156 Chara braunii HOM05D009556 ORTHO05D011767 1.5e-15 87.4 123 39.8
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 9.9e-12 74.7 103 43.7
MCO05G035 Micromonas commoda HOM05D009556 ORTHO05D011767 6.4e-11 72.0 98 43.9
Pp3c24_1471 Physcomitrium patens HOM05D009556 ORTHO05D011767 1.6e-09 67.4 149 30.9
Cre09.g405800 Chlamydomonas reinhardtii HOM05D002633 ORTHO05D002815 8.1e-06 55.1 120 26.7


User provided reference genes

Program Settings