Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0134800 Oryza sativa ssp. japonica HOM05D000044 ORTHO05D294980 9.1e-50 199.9 99 100.0
Os05g0134700 Oryza sativa ssp. japonica HOM05D000044 ORTHO05D049551 3.4e-28 128.3 98 64.3
Zm00001eb180880 Zea mays HOM05D000039 ORTHO05D049551 3.3e-15 85.1 77 53.2
Os01g0294700 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D037173 1.6e-09 66.2 76 42.1
Zm00001eb332160 Zea mays HOM05D000039 ORTHO05D037173 2.3e-08 62.4 76 42.1
Os01g0294500 Oryza sativa ssp. japonica HOM05D000044 ORTHO05D297771 5.1e-08 61.2 91 42.9
Os05g0134800 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D293053 1.9e-07 59.3 76 39.5
Zm00001eb129910 Zea mays HOM05D000039 ORTHO05D037173 1.9e-07 59.3 76 40.8
Zm00001eb417240 Zea mays HOM05D000039 ORTHO05D049487 1.9e-07 59.3 76 40.8
Os05g0134400 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D049487 2.5e-07 58.9 76 38.2
Os01g0293900 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D299980 5.6e-07 57.8 79 36.7
Os07g0156200 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D294548 5.6e-07 57.8 79 38.0
Os07g0156910 Oryza sativa ssp. japonica HOM05D000044 ORTHO05D294032 5.6e-07 57.8 79 38.0
Os07g0157600 Oryza sativa ssp. japonica HOM05D000044 ORTHO05D294468 5.6e-07 57.8 79 38.0


User provided reference genes

Program Settings