Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0110100 Oryza sativa ssp. japonica HOM05D034801 ORTHO05D050121 2.1e-161 572.4 313 100.0
Zm00001eb089470 Zea mays HOM05D034801 ORTHO05D050121 5.1e-70 268.9 293 54.9
Os04g0109500 Oryza sativa ssp. japonica HOM05D034801 ORTHO05D293549 1.7e-65 253.8 306 48.4
Os02g0712600 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001436 2.4e-11 73.9 235 32.8
Actinidia28760 Actinidia chinensis HOM05D000026 ORTHO05D001436 7.7e-10 68.9 316 28.8
QL06p053545 Quercus lobata HOM05D000026 ORTHO05D001436 2.9e-09 67.0 254 29.1
FvH4_1g09820 Fragaria vesca HOM05D000026 ORTHO05D001436 5.0e-09 66.2 347 26.8
GSVIVG01026418001 Vitis vinifera HOM05D000026 ORTHO05D001436 5.0e-09 66.2 295 26.8
Os08g0514100 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001436 6.5e-09 65.9 265 27.5
SalBow5G1423 Salvia bowleyana HOM05D000026 ORTHO05D001436 6.5e-09 65.9 300 28.0
Aqoxy6G03055 Aquilegia oxysepala HOM05D000026 ORTHO05D001436 1.4e-08 64.7 232 30.2
Nitab4.5_0011544g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.4e-08 64.7 256 27.7
Actinidia17136 Actinidia chinensis HOM05D000026 ORTHO05D001436 2.5e-08 63.9 269 30.5
Zm00001eb174500 Zea mays HOM05D000026 ORTHO05D001436 2.5e-08 63.9 230 30.9
CANSAT56G1422 Cannabis sativa HOM05D000026 ORTHO05D001436 4.2e-08 63.2 294 27.9
Nitab4.5_0012341g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.2e-07 61.6 256 26.6
FAN23G0895 Fragaria x ananassa HOM05D000026 ORTHO05D001436 1.6e-07 61.2 352 26.4
FAN28G0417 Fragaria x ananassa HOM05D000026 ORTHO05D001436 1.6e-07 61.2 357 27.5
ATR0605G290 Amborella trichopoda HOM05D000026 ORTHO05D001436 2.1e-07 60.8 324 26.2
FAN23G0177 Fragaria x ananassa HOM05D000026 ORTHO05D001436 2.1e-07 60.8 353 26.3
FAN26G2358 Fragaria x ananassa HOM05D000026 ORTHO05D001436 2.1e-07 60.8 353 26.3
Prupe.7G188700 Prunus persica HOM05D000026 ORTHO05D001436 3.6e-07 60.1 294 26.5
ECA246G1378 Erigeron canadensis HOM05D000026 ORTHO05D001436 4.7e-07 59.7 274 27.0
FAN19G0303 Fragaria x ananassa HOM05D000026 ORTHO05D001436 6.1e-07 59.3 352 26.7
TAR625G0480 Trochodendron aralioides HOM05D000026 ORTHO05D001436 6.1e-07 59.3 304 27.0
RcHm_v2.0_Chr2g0096621 Rosa chinensis HOM05D000026 ORTHO05D001436 7.9e-07 58.9 304 26.6
vmacro20417 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 2.3e-06 57.4 262 28.2
Zm00001eb092630 Zea mays HOM05D000026 ORTHO05D049967 2.3e-06 57.4 264 28.0
Eucgr.J02577 Eucalyptus grandis HOM05D000026 ORTHO05D001436 3.0e-06 57.0 239 26.8
TAR381G0752 Trochodendron aralioides HOM05D000026 ORTHO05D001436 3.0e-06 57.0 255 25.1
TAR381G0663 Trochodendron aralioides HOM05D000026 ORTHO05D001436 3.9e-06 56.6 255 25.1
Os02g0712700 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001436 8.8e-06 55.5 312 26.3
PGR119G1866 Punica granatum HOM05D000026 ORTHO05D001436 8.8e-06 55.5 193 29.5
vmacro20414 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 8.8e-06 55.5 325 27.4


User provided reference genes

Program Settings