Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.4e-131 473.0 252 100.0
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 4.8e-103 378.3 253 82.2
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.9e-80 303.1 213 70.9
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.4e-77 292.4 232 64.7
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 5.0e-76 288.5 223 66.8
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.1e-75 287.3 227 65.2
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.5e-75 286.2 214 66.4
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 5.5e-75 285.0 220 65.9
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.6e-74 283.5 218 67.0
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.6e-74 283.5 222 64.9
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.1e-74 283.1 222 66.7
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.1e-74 283.1 222 66.2
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.1e-74 283.1 222 66.2
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 4.6e-74 282.0 222 63.1
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 4.6e-74 282.0 224 64.3
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.8e-73 280.0 214 66.4
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.8e-73 280.0 226 63.3
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 3.9e-73 278.9 222 65.3
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.7e-73 278.1 231 63.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 8.8e-73 277.7 214 65.9
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 8.8e-73 277.7 227 62.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.1e-72 277.3 220 63.2
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 4.3e-72 275.4 214 62.6
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 5.7e-72 275.0 225 64.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 7.4e-72 274.6 215 66.5
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 7.4e-72 274.6 227 61.2
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 9.7e-72 274.2 224 60.7
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.3e-71 273.9 252 57.9
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.3e-71 273.9 229 65.1
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.3e-71 273.9 248 58.5
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.7e-71 273.5 226 64.6
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 2.2e-71 273.1 229 60.3
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 3.7e-71 272.3 225 61.8
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 3.7e-71 272.3 213 64.3
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.8e-71 271.9 227 62.6
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 6.3e-71 271.6 247 60.7
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 6.3e-71 271.6 247 60.7
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 8.2e-71 271.2 227 60.4
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.4e-70 270.4 214 63.6
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.4e-70 270.4 220 61.4
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.8e-70 270.0 247 60.7
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.8e-70 270.0 247 60.7
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.8e-70 270.0 213 62.4
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 4.1e-70 268.9 247 59.1
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 4.1e-70 268.9 221 61.1
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.1e-70 268.9 221 61.5
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 4.1e-70 268.9 226 62.4
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 5.3e-70 268.5 215 66.5
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 9.1e-70 267.7 247 59.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 9.1e-70 267.7 228 58.8
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-69 266.9 216 63.0
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.0e-69 266.5 214 64.5
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.0e-69 266.5 208 65.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.0e-69 266.5 221 62.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.5e-69 265.4 246 58.5
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 4.5e-69 265.4 226 62.4
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.5e-69 265.4 232 59.9
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 4.5e-69 265.4 227 61.7
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.0e-68 264.2 220 61.8
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.3e-68 263.8 214 62.6
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.7e-68 263.5 224 61.6
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.2e-68 263.1 215 65.1
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.9e-68 262.7 214 61.7
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 5.0e-68 261.9 215 64.2
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.5e-68 261.5 212 59.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 6.5e-68 261.5 212 61.8
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.1e-67 260.8 215 63.7
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.4e-67 260.4 221 59.7
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.4e-67 260.4 233 60.1
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.9e-67 260.0 227 60.8
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.5e-67 259.6 212 61.3
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.2e-67 259.2 219 59.4
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.2e-67 259.2 224 60.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 4.2e-67 258.8 204 67.2
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.2e-67 258.8 208 63.5
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 5.5e-67 258.5 212 59.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 5.5e-67 258.5 205 64.9
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 9.4e-67 257.7 215 63.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.2e-66 257.3 215 62.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.6e-66 256.9 220 60.0
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 4.7e-66 255.4 230 56.1
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 6.1e-66 255.0 208 63.0
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 7.9e-66 254.6 229 59.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.4e-65 253.8 224 61.2
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.8e-65 253.4 214 62.6
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.1e-64 250.8 212 60.8
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.0e-64 250.0 214 61.2
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 2.6e-64 249.6 193 64.8
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 3.7e-63 245.7 214 58.9
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.4e-62 243.8 212 57.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.0e-60 237.7 225 54.7
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.7e-60 236.9 212 56.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 6.7e-57 224.9 214 54.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 8.8e-57 224.6 225 51.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 5.7e-56 221.9 206 55.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 5.9e-53 211.8 213 50.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 6.5e-52 208.4 174 59.2
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.4e-51 204.5 144 67.4
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.8e-49 200.3 227 48.0
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 8.3e-47 191.4 214 50.5
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.7e-37 159.8 228 42.1
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 5.2e-33 145.6 159 52.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 9.2e-30 134.8 101 68.3
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.0e-28 131.3 175 43.4
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.2e-26 124.4 99 65.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.8e-25 120.6 235 35.7
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 4.0e-25 119.4 90 66.7
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.9e-20 102.8 79 69.6
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.4e-16 89.7 197 30.5
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 7.1e-14 82.0 157 33.8
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 9.9e-08 61.6 52 61.5
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-06 58.2 57 52.6


User provided reference genes

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