Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 6.9e-90 334.0 170 100.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 3.2e-87 325.1 170 96.5
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 7.2e-87 323.9 170 97.1
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 95.3
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 95.3
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 95.9
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 96.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 95.9
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.7e-86 322.0 170 95.9
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.7e-86 322.0 170 95.9
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.7e-86 322.0 170 95.3
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 95.9
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 95.3
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 94.7
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.3
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 6.1e-86 320.9 169 95.9
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 94.7
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 6.1e-86 320.9 169 95.9
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 95.3
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 95.3
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 95.3
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 94.1
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.8e-85 319.3 170 94.7
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.8e-85 319.3 188 88.8
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 94.7
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 92.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.3
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 94.7
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 94.7
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 94.1
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 94.1
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.1
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 94.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 94.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 94.6
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 92.9
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.0e-84 315.8 168 92.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 92.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 92.9
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 92.4
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.7e-84 314.3 176 92.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 5.7e-84 314.3 169 93.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 92.4
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.3e-83 313.2 168 94.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 92.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 92.9
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 2.2e-83 312.4 170 92.4
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 91.8
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.8e-83 312.0 167 95.2
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 3.7e-83 311.6 167 93.4
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 91.2
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 4.8e-83 311.2 170 92.4
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 91.2
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.2
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 91.2
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 3.1e-82 308.5 183 87.4
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.1e-82 308.5 170 90.6
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.2e-81 306.6 183 86.9
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-81 305.1 170 92.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.5e-81 304.7 190 85.3
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.3e-80 303.1 169 91.7
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.7e-80 302.8 166 90.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.2e-80 302.4 170 91.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.1e-79 300.1 169 90.5
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.5e-79 299.7 168 88.7
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 7.2e-79 297.4 157 93.6
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 6.1e-78 294.3 167 87.4
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.4e-77 293.1 168 87.5
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 1.8e-77 292.7 157 93.0
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 8.8e-77 290.4 164 89.0
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.1e-76 290.0 175 87.4
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 6.3e-75 284.3 162 89.5
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.1e-74 282.0 151 93.4
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 2.0e-73 279.3 151 92.1
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 3.5e-73 278.5 150 92.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 5.9e-73 277.7 147 94.6
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 8.5e-72 273.9 147 93.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 4.2e-71 271.6 169 77.5
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 6.1e-70 267.7 147 91.2
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.3e-69 265.8 139 95.7
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 5.2e-69 264.6 140 93.6
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 5.2e-69 264.6 140 94.3
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 3.4e-68 261.9 139 93.5
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 5.7e-68 261.2 170 81.8
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.8e-67 258.8 139 92.1
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 1.6e-65 253.1 262 57.6
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.5e-65 251.9 164 81.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 5.0e-64 248.1 170 78.2
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.5e-63 246.5 168 78.0
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.5e-63 246.5 170 79.4
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.8e-61 239.6 128 93.8
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 2.3e-61 239.2 130 93.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 3.5e-57 225.3 229 60.3
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 5.9e-57 224.6 125 92.0
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.7e-56 223.0 120 95.0
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.7e-56 223.0 120 95.0
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.3e-56 222.6 233 58.8
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 1.9e-55 219.5 129 84.5
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.0e-52 209.5 169 61.5
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.9e-51 204.9 109 95.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.1e-50 203.8 110 92.7
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.3e-43 180.3 115 80.9
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 4.9e-43 178.3 176 52.8
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.0e-41 172.9 170 59.4
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 4.6e-33 145.2 75 96.0
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 4.6e-33 145.2 76 93.4
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.0e-32 144.1 117 65.8
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.3e-32 143.7 75 96.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 4.1e-26 122.1 73 80.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 6.6e-24 114.8 60 91.7
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 9.6e-23 110.9 69 82.6
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.2e-19 99.8 50 96.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.0e-13 79.0 38 92.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-10 70.9 39 84.6
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.5e-07 59.7 30 96.7


User provided reference genes

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