Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0836600 Oryza sativa ssp. japonica HOM05D036098 ORTHO05D037079 1.8e-150 535.8 257 100.0
Os01g0784000 Oryza sativa ssp. japonica HOM05D036098 ORTHO05D037079 2.4e-41 173.3 110 72.7
Os11g0621200 Oryza sativa ssp. japonica HOM05D036098 ORTHO05D037079 2.4e-41 173.3 110 72.7
Aqoxy4G01530 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.1e-13 79.0 252 27.0
PSO302G0073 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-12 76.6 151 29.1
PSO017G0311 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-12 75.9 152 30.9
PSO532G0003 Papaver somniferum HOM05D000003 ORTHO05D000004 7.4e-11 72.0 236 25.8
Aqoxy4G00730 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.7e-11 71.6 175 28.6
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 1.7e-10 70.9 151 29.1
PSO302G0306 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-10 70.1 160 25.0
PSO782G5208 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-10 69.7 223 27.4
QL12p029380 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-10 69.7 119 29.4
Aqoxy6G02512 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.2e-10 68.6 159 29.6
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-09 68.2 136 30.1
Aa31sc773G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-09 67.4 147 30.6
Aqoxy6G02493 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-09 67.4 159 28.9
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 1.8e-09 67.4 210 26.2
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-09 67.4 147 29.3
PSO423G0152 Papaver somniferum HOM05D000003 ORTHO05D000004 2.4e-09 67.0 155 26.5
BcaC04g19166 Brassica carinata HOM05D000003 ORTHO05D000925 3.1e-09 66.6 148 25.7
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.1e-09 66.2 140 30.7
PSO357G0590 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-09 66.2 142 28.2
Aa31sc77G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.0e-09 65.5 145 24.1
QL04p039404 Quercus lobata HOM05D000003 ORTHO05D000004 7.0e-09 65.5 140 28.6
PSO339G3647 Papaver somniferum HOM05D000003 ORTHO05D000004 9.1e-09 65.1 238 26.1
Ah.15g100100 Amaranthus hybridus HOM05D000003 ORTHO05D000004 2.0e-08 63.9 118 28.8
Aqoxy1G03268 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-08 63.5 148 28.4
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 5.9e-08 62.4 120 27.5
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-08 62.0 185 25.9
ECA233G6064 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.7e-08 62.0 231 26.8
TPR.G13582 Trifolium pratense HOM05D000003 ORTHO05D002335 7.7e-08 62.0 153 26.1
AL4G28120 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.0e-07 61.6 260 25.4
ECA246G3864 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-07 61.6 261 24.1
ECA246G5162 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-07 61.6 156 26.9
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 1.0e-07 61.6 152 29.6
PSO170G3784 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-07 61.6 223 24.2
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 1.0e-07 61.6 123 27.6
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 1.3e-07 61.2 151 27.2
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-07 60.8 120 27.5
HanXRQChr05g0148651 Helianthus annuus HOM05D000003 ORTHO05D000004 2.2e-07 60.5 165 25.5
PGSC0003DMG400013620 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 142 26.8
Zm00001eb279530 Zea mays HOM05D000003 ORTHO05D000004 2.2e-07 60.5 214 24.3
BraA08t32601Z Brassica rapa HOM05D000003 ORTHO05D000925 2.9e-07 60.1 157 24.8
Peaxi162Scf00118g00214 Petunia axillaris HOM05D000003 ORTHO05D000006 2.9e-07 60.1 161 26.7
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-07 59.7 148 27.0
PSO063G3379 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-07 59.7 148 27.7
PSO541G1607 Papaver somniferum HOM05D000003 ORTHO05D001026 3.8e-07 59.7 231 24.2
CANSAT21G1547 Cannabis sativa HOM05D000003 ORTHO05D000167 5.0e-07 59.3 125 30.4
AUR62022035 Chenopodium quinoa HOM05D000022 ORTHO05D013985 5.0e-07 59.3 127 27.6
AUR62044423 Chenopodium quinoa HOM05D000022 ORTHO05D013985 5.0e-07 59.3 127 27.6
BolC6t37188H Brassica oleracea HOM05D000003 ORTHO05D000925 6.5e-07 58.9 157 26.1
ECA236G1930 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.5e-07 58.9 250 23.2
PSO425G0059 Papaver somniferum HOM05D000003 ORTHO05D000004 6.5e-07 58.9 225 23.6
SGA_v2.0_scaffold232G43526 Striga asiatica HOM05D015157 ORTHO05D011148 6.5e-07 58.9 152 26.3
AUR62034895 Chenopodium quinoa HOM05D000003 ORTHO05D000022 8.5e-07 58.5 125 24.8
COL.COLO4_35856 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.5e-07 58.5 139 25.2
PSO302G0310 Papaver somniferum HOM05D000003 ORTHO05D000004 8.5e-07 58.5 221 24.0
EL10Ac5g12700 Beta vulgaris HOM05D059476 ORTHO05D038998 1.1e-06 58.2 124 29.0
ECA236G0216 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 58.2 164 25.6
HanXRQChr17g0550341 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-06 58.2 163 22.7
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 57.8 140 25.7
Aa31LG2G18410 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 57.8 154 25.3
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 1.5e-06 57.8 150 24.0
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.5e-06 57.8 164 28.0
ECA247G3849 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.5e-06 57.8 260 23.5
PSO478G3613 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.8 198 25.8
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-06 57.4 242 23.1
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.9e-06 57.4 184 25.5
ECA236G0696 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.4 231 26.8
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-06 57.0 144 23.6
BraA04t16438Z Brassica rapa HOM05D000003 ORTHO05D001498 2.5e-06 57.0 148 26.4
Lj4g0022951 Lotus japonicus HOM05D013665 ORTHO05D011148 2.5e-06 57.0 144 29.2
PSO675G3659 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-06 57.0 202 27.2
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.5e-06 57.0 231 22.5
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 139 26.6
ECA236G3861 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.2e-06 56.6 208 27.9
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 3.2e-06 56.6 116 28.4
PSO675G4734 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 56.6 158 25.9
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 3.2e-06 56.6 124 29.0
TPR.G14179 Trifolium pratense HOM05D002545 ORTHO05D002335 3.2e-06 56.6 156 24.4
BcaB02g08571 Brassica carinata HOM05D000003 ORTHO05D000925 4.2e-06 56.2 142 26.8
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 4.2e-06 56.2 141 24.8
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 56.2 180 25.6
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 5.5e-06 55.8 163 25.2
ECA246G5223 Erigeron canadensis HOM05D000003 ORTHO05D000283 5.5e-06 55.8 151 23.2
Gorai.012G058800 Gossypium raimondii HOM05D031998 ORTHO05D011148 5.5e-06 55.8 139 28.8
Aa31LG10G16810 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-06 55.5 147 25.2
BcaB05g23837 Brassica carinata HOM05D000003 ORTHO05D000925 7.2e-06 55.5 164 24.4
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 7.2e-06 55.5 221 23.1
COL.COLO4_21884 Corchorus olitorius HOM05D000003 ORTHO05D000004 9.4e-06 55.1 147 27.2
Dinv07814 Davidia involucrata HOM05D000003 ORTHO05D000283 9.4e-06 55.1 140 24.3
PSO384G4642 Papaver somniferum HOM05D000003 ORTHO05D000004 9.4e-06 55.1 167 26.3
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-06 55.1 138 27.5


User provided reference genes

Program Settings