Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.5e-195 686.0 359 100.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 4.2e-137 491.9 343 74.6
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.7e-133 478.8 336 73.5
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 3.7e-133 478.8 341 73.0
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.4e-132 476.9 339 73.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.4e-132 476.1 336 74.4
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 7.0e-132 474.6 336 74.1
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 7.0e-132 474.6 334 73.7
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.5e-131 473.4 344 72.1
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 2.6e-131 472.6 343 72.9
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 2.6e-131 472.6 362 70.4
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 5.9e-131 471.5 344 72.1
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 5.9e-131 471.5 358 69.3
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.0e-130 470.7 332 73.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.2e-130 469.5 360 67.8
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.9e-130 469.2 344 71.8
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 3.8e-130 468.8 338 71.3
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 6.5e-130 468.0 337 72.4
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 6.5e-130 468.0 357 70.0
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 8.5e-130 467.6 335 72.5
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 1.1e-129 467.2 357 70.6
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.4e-129 466.8 334 71.3
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 2.5e-129 466.1 328 72.6
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 4.2e-129 465.3 345 71.3
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 4.2e-129 465.3 345 71.3
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 7.2e-129 464.5 333 72.4
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 7.2e-129 464.5 356 69.7
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 9.4e-129 464.2 339 72.3
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 9.4e-129 464.2 339 72.3
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 9.4e-129 464.2 359 69.6
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.6e-128 463.4 362 69.6
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.6e-128 463.4 358 69.0
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.6e-128 463.4 335 72.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.6e-128 463.4 333 73.0
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 2.1e-128 463.0 356 67.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-128 463.0 340 72.1
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.6e-128 462.2 335 71.9
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 4.7e-128 461.8 340 71.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 6.1e-128 461.5 340 71.5
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 6.1e-128 461.5 374 67.4
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 6.1e-128 461.5 363 67.8
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.0e-127 460.7 333 71.2
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.0e-127 460.7 354 67.2
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.0e-127 460.7 334 71.3
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.0e-127 460.7 334 71.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.0e-127 460.7 332 72.3
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 1.4e-127 460.3 338 72.5
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.8e-127 459.9 340 71.2
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.3e-127 459.5 342 69.9
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 2.3e-127 459.5 334 71.6
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 5.2e-127 458.4 360 69.4
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 6.7e-127 458.0 358 67.6
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 8.8e-127 457.6 334 71.3
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 8.8e-127 457.6 336 71.7
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 8.8e-127 457.6 333 70.9
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.5e-126 456.8 334 71.3
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 2.6e-126 456.1 333 70.3
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 3.3e-126 455.7 354 66.4
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 3.3e-126 455.7 334 71.0
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 5.7e-126 454.9 334 71.6
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 5.7e-126 454.9 343 69.7
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 7.4e-126 454.5 356 68.5
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 8.2e-125 451.1 333 69.4
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 3.1e-124 449.1 342 69.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 4.1e-124 448.7 337 70.9
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 5.3e-124 448.4 363 65.6
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 9.1e-124 447.6 339 66.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 9.1e-124 447.6 334 69.5
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.6e-123 446.8 364 64.8
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 2.0e-123 446.4 371 64.2
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 2.6e-123 446.0 360 65.3
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 5.9e-123 444.9 371 63.9
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.0e-122 444.1 333 70.3
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.3e-122 443.7 361 64.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 8.5e-122 441.0 334 67.7
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 9.4e-121 437.6 361 64.8
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 3.6e-120 435.6 334 67.4
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 3.6e-120 435.6 334 67.4
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.6e-120 435.6 334 67.4
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 6.1e-120 434.9 358 64.2
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.8e-119 433.3 336 69.0
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.0e-119 432.6 334 67.1
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.0e-119 432.2 360 63.9
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.0e-118 429.9 361 64.3
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 7.5e-118 427.9 339 67.3
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.7e-117 426.8 269 86.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 7.7e-115 417.9 356 63.8
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.5e-113 413.7 298 72.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 6.3e-109 398.3 269 76.6
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 6.3e-109 398.3 330 62.4
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.4e-108 397.1 269 75.8
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 7.7e-107 391.3 330 60.3
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 5.2e-103 378.6 328 60.4
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.0e-98 364.4 356 57.9
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.5e-94 350.5 267 68.5
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 2.6e-78 296.6 257 65.0
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.2e-76 289.7 264 59.8
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 7.3e-73 278.5 354 48.6
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 3.6e-72 276.2 328 46.3
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 9.2e-68 261.5 270 55.2
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.6e-67 260.8 228 64.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 4.6e-67 259.2 302 49.7
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.4e-62 243.0 354 43.5
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.2e-60 236.1 357 44.5
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.9e-58 229.6 143 81.8
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.5e-57 226.9 197 62.4
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 9.3e-52 208.4 183 61.2
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 6.0e-51 205.7 190 56.8
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.1e-47 194.9 140 68.6
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.4e-47 193.7 187 61.5
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.5e-43 179.9 135 68.1
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.5e-41 174.5 263 41.1
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 5.0e-37 159.5 91 87.9
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.6e-35 154.5 115 68.7
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 7.9e-27 125.6 131 51.1
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 3.7e-24 116.7 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 8.5e-21 105.5 57 91.2
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.9e-18 96.7 86 55.8
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 9.1e-15 85.5 114 49.1
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 9.1e-15 85.5 49 85.7
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.3e-13 81.6 43 95.3
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 4.2e-12 76.6 46 80.4


User provided reference genes

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