Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0680500 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.8e-69 263.8 131 100.0
Os03g0680600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.3e-21 104.8 128 48.4
Os03g0679800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.7e-16 87.8 104 44.2
Zm00001eb034120 Zea mays HOM05D001789 ORTHO05D001755 1.5e-15 86.7 96 47.9
Os03g0680566 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.4e-13 79.3 74 56.8
Os03g0680400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 6.9e-13 77.8 90 48.9
Os12g0636100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.0e-11 71.6 106 43.4
Os03g0680200 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.4e-10 70.1 65 52.3
Thhalv10020698m.g Eutrema salsugineum HOM05D001789 ORTHO05D001755 9.3e-10 67.4 100 41.0
Os12g0599900 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.3e-10 67.4 101 39.6
Os12g0600100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.2e-09 67.0 101 38.6
BcaC01g04353 Brassica carinata HOM05D001789 ORTHO05D001755 1.6e-09 66.6 101 40.6
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 1.6e-09 66.6 101 40.6
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 1.6e-09 66.6 101 40.6
SalBow8G1668 Salvia bowleyana HOM05D001789 ORTHO05D001755 7.9e-09 64.3 101 39.6
Os01g0175400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.8e-08 63.2 108 37.0
Os02g0492000 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 2.3e-08 62.8 103 38.8
Os09g0124800 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 3.9e-08 62.0 101 41.6
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 6.7e-08 61.2 101 38.6
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 1.1e-07 60.5 101 38.6
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 1.5e-07 60.1 99 41.4
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 1.5e-07 60.1 101 37.6
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.9e-07 59.7 107 39.3
Os02g0494400 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.9e-07 59.7 101 39.6
Solyc01g097220.3 Solanum lycopersicum HOM05D001789 ORTHO05D001755 2.5e-07 59.3 101 34.7
Sopen01g040890 Solanum pennellii HOM05D001789 ORTHO05D001755 2.5e-07 59.3 101 34.7
Psat0s1144g0120 Pisum sativum HOM05D001789 ORTHO05D001755 3.3e-07 58.9 104 38.5
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 4.3e-07 58.5 101 39.6
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 7.4e-07 57.8 101 38.6
Os01g0189100 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 9.7e-07 57.4 109 37.6
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 1.3e-06 57.0 103 35.0
Os09g0123500 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 1.3e-06 57.0 97 38.1
Zm00001eb031110 Zea mays HOM05D001789 ORTHO05D001755 1.3e-06 57.0 99 37.4
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 1.6e-06 56.6 101 35.6
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 1.6e-06 56.6 101 37.6
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 2.2e-06 56.2 101 39.6
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 2.2e-06 56.2 101 39.6
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 3.7e-06 55.5 101 39.6
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 3.7e-06 55.5 101 39.6
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 3.7e-06 55.5 104 37.5
Hund02888 Selenicereus undatus HOM05D001789 ORTHO05D001755 3.7e-06 55.5 101 31.7
PSO384G2589 Papaver somniferum HOM05D001789 ORTHO05D001755 4.8e-06 55.1 111 32.4
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 8.2e-06 54.3 101 35.6
PSO384G0184 Papaver somniferum HOM05D001789 ORTHO05D001755 8.2e-06 54.3 100 34.0


User provided reference genes

Program Settings