Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0675700 Oryza sativa ssp. japonica HOM05D008250 ORTHO05D010361 1.6e-36 155.6 80 100.0
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 9.1e-08 60.1 50 60.0
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 1.2e-07 59.7 39 66.7
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 1.6e-07 59.3 55 58.2
SEGI_25339 Sequoiadendron giganteum HOM05D008250 ORTHO05D010361 1.6e-07 59.3 39 66.7
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 2.0e-07 58.9 53 56.6
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 2.7e-07 58.5 53 58.5
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 2.7e-07 58.5 55 58.2
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 3.5e-07 58.2 70 48.6
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 3.5e-07 58.2 50 58.0
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 3.5e-07 58.2 50 58.0
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 3.5e-07 58.2 55 56.4
CARHR279880 Cardamine hirsuta HOM05D008250 ORTHO05D010361 4.5e-07 57.8 43 60.5
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 4.5e-07 57.8 50 56.0
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 4.5e-07 57.8 43 65.1
Carub.0008s2677 Capsella rubella HOM05D008250 ORTHO05D010361 5.9e-07 57.4 43 60.5
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 5.9e-07 57.4 46 63.0
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 5.9e-07 57.4 46 63.0
AT5G65880 Arabidopsis thaliana HOM05D008250 ORTHO05D010361 7.7e-07 57.0 43 60.5
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 7.7e-07 57.0 51 51.0
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 7.7e-07 57.0 50 56.0
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 1.0e-06 56.6 49 55.1
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 1.3e-06 56.2 36 63.9
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 1.3e-06 56.2 39 66.7
AL8G43594 Arabidopsis lyrata HOM05D008250 ORTHO05D010361 1.7e-06 55.8 43 60.5
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 1.7e-06 55.8 45 57.8
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 3.8e-06 54.7 48 54.2
Lalb_Chr05g0230301 Lupinus albus HOM05D008250 ORTHO05D010361 5.0e-06 54.3 34 67.6
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 5.0e-06 54.3 48 54.2
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 5.0e-06 54.3 55 54.5
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 6.5e-06 53.9 51 52.9
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 6.5e-06 53.9 55 54.5


User provided reference genes

Program Settings