Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0669900 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 1.8e-287 991.9 501 100.0
Os03g0668000 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.7e-89 333.6 502 41.0
Os03g0664300 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.9e-83 313.5 514 40.9
Os04g0113000 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 3.9e-72 276.6 491 37.1
Os01g0824700 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.9e-59 233.8 359 42.1
Os11g0633800 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 4.2e-58 229.9 563 32.7
Os03g0652400 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.6e-44 184.1 253 45.8
Zm00001eb312790 Zea mays HOM05D010868 ORTHO05D012866 3.9e-40 170.2 531 31.8
Zm00001eb116750 Zea mays HOM05D010868 ORTHO05D012866 5.7e-39 166.4 302 37.7
Os03g0653100 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.6e-36 157.5 194 47.4
Zm00001eb312730 Zea mays HOM05D010868 ORTHO05D012866 2.8e-30 137.5 385 32.7
Os02g0149500 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 4.7e-17 93.6 156 39.1
Os07g0189400 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 3.0e-16 90.9 108 47.2
Os03g0668100 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 2.2e-14 84.7 108 49.1
Os03g0632200 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 4.8e-14 83.6 109 45.0
MBI05_g44031_MAGBIO Magnolia biondii HOM05D016110 ORTHO05D000491 8.2e-14 82.8 323 25.7
Os03g0677101 Oryza sativa ssp. japonica HOM05D010868 ORTHO05D012866 5.3e-13 80.1 93 49.5
Zm00001eb366400 Zea mays HOM05D000664 ORTHO05D000491 5.0e-11 73.6 325 28.6
Zm00001eb301870 Zea mays HOM05D009359 ORTHO05D011905 7.2e-10 69.7 221 28.5
Zm00001eb115740 Zea mays HOM05D009359 ORTHO05D000491 9.4e-10 69.3 333 24.9
Zm00001eb116670 Zea mays HOM05D009359 ORTHO05D000491 1.6e-09 68.6 333 24.6
Zm00001eb301850 Zea mays HOM05D009359 ORTHO05D011905 3.6e-09 67.4 346 24.9
Zm00001eb116720 Zea mays HOM05D009359 ORTHO05D000491 1.8e-08 65.1 333 24.0
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.0e-08 64.3 331 23.0
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 3.0e-08 64.3 328 24.7
Zm00001eb312670 Zea mays HOM05D010868 ORTHO05D012866 4.0e-08 63.9 123 40.7
Gohir.D10G001700 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.7e-08 63.2 370 22.4
Os08g0529400 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D010075 8.8e-08 62.8 245 28.2
Os01g0876300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 2.0e-07 61.6 320 27.5
Os05g0172500 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.6e-07 61.2 355 24.8
Thecc.06G054800 Theobroma cacao HOM05D000664 ORTHO05D000491 4.4e-07 60.5 340 21.5
Gohir.A10G001600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.7e-07 60.1 370 22.2
Gorai.011G002100 Gossypium raimondii HOM05D000664 ORTHO05D000491 5.7e-07 60.1 370 22.2
Os07g0535100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.2e-06 58.2 184 30.4
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 2.8e-06 57.8 333 23.4
ECA238G1624 Erigeron canadensis HOM05D000664 ORTHO05D000491 2.8e-06 57.8 357 23.0
Zm00001eb036470 Zea mays HOM05D009359 ORTHO05D012866 4.8e-06 57.0 324 24.4
Aqoxy4G02350 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 8.2e-06 56.2 136 25.0
Os07g0535200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 8.2e-06 56.2 184 29.9


User provided reference genes

Program Settings