Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60470H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC29t60593H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC35t60746H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC46t61004H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC46t61031H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC47t61093H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BolSC49t61179H Brassica oleracea HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraA06t25419Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC103t45462Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC103t45470Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC138t45572Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC25t45862Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC58t46424Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
BraSC59t46587Z Brassica rapa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
ClCG02G011250 Citrullus lanatus HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Gohir.1Z050080 Gossypium hirsutum HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Gohir.A05G086232 Gossypium hirsutum HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Gohir.D01G101917 Gossypium hirsutum HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Gohir.D11G239900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Os03g0667201 Oryza sativa ssp. japonica HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
PSO548G0107 Papaver somniferum HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Potri.013G162100 Populus trichocarpa HOM05D002194 ORTHO05D010880 9.2e-14 79.0 39 100.0
Gohir.A01G150018 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.2e-13 78.6 39 97.4
Gohir.D11G308550 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.2e-13 78.6 39 97.4
ClCG06G017240 Citrullus lanatus HOM05D002194 ORTHO05D010880 2.1e-13 77.8 39 97.4
Gorai.007G253400 Gossypium raimondii HOM05D002194 ORTHO05D010880 2.7e-13 77.4 39 97.4
ATCG00560 Arabidopsis thaliana HOM05D002194 ORTHO05D010880 3.5e-13 77.0 39 97.4
DCAR_032499 Daucus carota HOM05D002194 ORTHO05D010880 3.5e-13 77.0 39 97.4
Lalb_Chr23g0274491 Lupinus albus HOM05D002194 ORTHO05D010880 3.5e-13 77.0 38 100.0
Medtr4g050850 Medicago truncatula HOM05D002194 ORTHO05D002840 3.5e-13 77.0 38 100.0
SalBow1G3226 Salvia bowleyana HOM05D002194 ORTHO05D010880 3.5e-13 77.0 39 97.4
AL2G21580 Arabidopsis lyrata HOM05D002194 ORTHO05D002840 1.0e-12 75.5 39 94.9
ClCG00G004310 Citrullus lanatus HOM05D002194 ORTHO05D010880 1.3e-12 75.1 39 97.4
LjContig00318g0008472 Lotus japonicus HOM05D002194 ORTHO05D002840 1.3e-12 75.1 38 97.4
Gohir.D06G105440 Gossypium hirsutum HOM05D002194 ORTHO05D010880 1.7e-12 74.7 39 94.9
Gorai.007G008800 Gossypium raimondii HOM05D002194 ORTHO05D010880 2.3e-12 74.3 39 94.9
Nitab4.5_0002611g0090 Nicotiana tabacum HOM05D002194 ORTHO05D010880 3.0e-12 73.9 38 97.4
arahy.Tifrunner.gnm1.ann1.P1LA7E Arachis hypogaea HOM05D002194 ORTHO05D002840 3.3e-11 70.5 37 94.6
Gohir.D01G028900 Gossypium hirsutum HOM05D002194 ORTHO05D010880 5.6e-11 69.7 39 87.2
CAN.G841.3 Capsicum annuum HOM05D002194 ORTHO05D010880 7.3e-11 69.3 39 89.7
Nitab4.5_0001783g0080 Nicotiana tabacum HOM05D002194 ORTHO05D002840 7.3e-11 69.3 38 86.8
Peaxi162Scf00225g00087 Petunia axillaris HOM05D002194 ORTHO05D010880 3.8e-07 57.0 27 96.3
Nitab4.5_0000959g0050 Nicotiana tabacum HOM05D002194 ORTHO05D002840 4.9e-07 56.6 30 86.7
Nitab4.5_0001127g0300 Nicotiana tabacum HOM05D002194 ORTHO05D002840 1.9e-06 54.7 25 100.0


User provided reference genes

Program Settings