Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0356498 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 4.4e-46 187.6 93 100.0
Zm00001eb017260 Zea mays HOM05D002775 ORTHO05D003262 9.8e-38 159.8 80 95.0
Os07g0659400 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 3.7e-29 131.3 88 69.3
Zm00001eb329780 Zea mays HOM05D002775 ORTHO05D003262 1.1e-28 129.8 90 67.8
Zm00001eb110760 Zea mays HOM05D002775 ORTHO05D003262 1.4e-28 129.4 84 69.0
Eucgr.A02255 Eucalyptus grandis HOM05D002775 ORTHO05D003262 4.1e-28 127.9 89 67.4
Aa31LG3G760 Aethionema arabicum HOM05D002775 ORTHO05D003262 5.4e-28 127.5 74 77.0
Nn7g36669 Nelumbo nucifera HOM05D002775 ORTHO05D003262 1.2e-27 126.3 88 69.3
CARHR136340 Cardamine hirsuta HOM05D002775 ORTHO05D003262 1.6e-27 125.9 74 75.7
HPP92_013974 Vanilla planifolia HOM05D002775 ORTHO05D003262 1.6e-27 125.9 87 69.0
CsaV3_3G040280 Cucumis sativus L. HOM05D002775 ORTHO05D003262 2.1e-27 125.6 88 65.9
Manes.09G006500 Manihot esculenta HOM05D002775 ORTHO05D003262 2.1e-27 125.6 89 65.2
MELO3C009765.2 Cucumis melo HOM05D002775 ORTHO05D003262 3.5e-27 124.8 88 65.9
Sed0003281 Sechium edule HOM05D002775 ORTHO05D003262 3.5e-27 124.8 77 70.1
THA.LOC104824403 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 3.5e-27 124.8 71 76.1
AL4G39230 Arabidopsis lyrata HOM05D002775 ORTHO05D003262 4.6e-27 124.4 74 74.3
AT2G41250 Arabidopsis thaliana HOM05D002775 ORTHO05D003262 4.6e-27 124.4 74 74.3
THA.LOC104816223 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 6.0e-27 124.0 71 76.1
Carub.0004s2357 Capsella rubella HOM05D002775 ORTHO05D003262 1.3e-26 122.9 74 73.0
PGR031G2172 Punica granatum HOM05D002775 ORTHO05D003262 1.3e-26 122.9 76 72.4
Sed0003461 Sechium edule HOM05D002775 ORTHO05D003262 1.3e-26 122.9 77 70.1
Sabra06G0027700 Salix brachista HOM05D002775 ORTHO05D003262 1.7e-26 122.5 82 72.0
Manes.08G058400 Manihot esculenta HOM05D002775 ORTHO05D003262 2.3e-26 122.1 83 65.1
QL07p009774 Quercus lobata HOM05D002775 ORTHO05D003262 2.3e-26 122.1 71 74.6
Oeu008217.1 Olea europaea HOM05D002775 ORTHO05D003262 3.0e-26 121.7 71 77.5
RcHm_v2.0_Chr2g0125431 Rosa chinensis HOM05D002775 ORTHO05D003262 3.0e-26 121.7 83 67.5
Hund24623 Selenicereus undatus HOM05D002775 ORTHO05D003262 3.0e-26 121.7 72 77.8
arahy.Tifrunner.gnm1.ann1.LX9DGM Arachis hypogaea HOM05D002775 ORTHO05D003262 3.9e-26 121.3 79 69.6
arahy.Tifrunner.gnm1.ann1.S2PB51 Arachis hypogaea HOM05D002775 ORTHO05D003262 3.9e-26 121.3 79 69.6
CDE05G0954 Ceratophyllum demersum HOM05D002775 ORTHO05D003262 3.9e-26 121.3 77 71.4
Thhalv10016879m.g Eutrema salsugineum HOM05D002775 ORTHO05D003262 3.9e-26 121.3 74 73.0
Lalb_Chr25g0286931 Lupinus albus HOM05D002775 ORTHO05D003262 3.9e-26 121.3 75 72.0
MD14G1085300 Malus domestica HOM05D002775 ORTHO05D003262 3.9e-26 121.3 76 71.1
CiPaw.09G046700 Carya illinoinensis HOM05D002775 ORTHO05D003262 5.1e-26 120.9 71 73.2
Ciclev10005563m.g Citrus clementina HOM05D002775 ORTHO05D003262 6.6e-26 120.6 71 74.6
Potri.006G040800 Populus trichocarpa HOM05D002775 ORTHO05D003262 6.6e-26 120.6 74 74.3
BcaC02g12889 Brassica carinata HOM05D002775 ORTHO05D003262 8.6e-26 120.2 71 76.1
C04p68860 Brassica napus HOM05D002775 ORTHO05D003262 8.6e-26 120.2 73 74.0
BolC4t28390H Brassica oleracea HOM05D002775 ORTHO05D003262 8.6e-26 120.2 73 74.0
CANSAT64G2189 Cannabis sativa HOM05D002775 ORTHO05D003262 8.6e-26 120.2 88 62.5
MD12G1093300 Malus domestica HOM05D002775 ORTHO05D003262 8.6e-26 120.2 94 61.7
Prupe.7G041200 Prunus persica HOM05D002775 ORTHO05D003262 8.6e-26 120.2 93 64.5
Sabra16G0039600 Salix brachista HOM05D002775 ORTHO05D003262 8.6e-26 120.2 82 69.5
Sabra16G0044300 Salix brachista HOM05D002775 ORTHO05D003262 8.6e-26 120.2 82 69.5
Atru.chr1.1504 Acer truncatum HOM05D002775 ORTHO05D003262 1.1e-25 119.8 83 63.9
ClCG10G016140 Citrullus lanatus HOM05D002775 ORTHO05D003262 1.1e-25 119.8 88 62.5
FvH4_6g25490 Fragaria vesca HOM05D002775 ORTHO05D003262 1.1e-25 119.8 71 74.6
FAN02G3594 Fragaria x ananassa HOM05D002775 ORTHO05D003262 1.1e-25 119.8 71 74.6
FAN05G2772 Fragaria x ananassa HOM05D002775 ORTHO05D003262 1.1e-25 119.8 71 74.6
Potri.016G037600 Populus trichocarpa HOM05D002775 ORTHO05D003262 1.1e-25 119.8 97 62.9
VMungo1383G3448 Vigna mungo HOM05D002775 ORTHO05D003262 1.1e-25 119.8 81 67.9
Glyma.03G130300 Glycine max HOM05D002775 ORTHO05D003262 1.5e-25 119.4 76 69.7
Phvul.001G126300 Phaseolus vulgaris HOM05D002775 ORTHO05D003262 1.9e-25 119.0 81 66.7
TAR636G1121 Trochodendron aralioides HOM05D002775 ORTHO05D003262 1.9e-25 119.0 88 64.8
CAN.G641.55 Capsicum annuum HOM05D002775 ORTHO05D003262 2.5e-25 118.6 75 70.7
A04p31450 Brassica napus HOM05D002775 ORTHO05D003262 3.3e-25 118.2 71 74.6
BraA04t18602Z Brassica rapa HOM05D002775 ORTHO05D003262 3.3e-25 118.2 71 74.6
Cfa020016 Carpinus fangiana HOM05D002775 ORTHO05D003262 3.3e-25 118.2 71 71.8
Lj1g0020632 Lotus japonicus HOM05D002775 ORTHO05D003262 3.3e-25 118.2 73 72.6
Sp4g23570 Schrenkiella parvula HOM05D002775 ORTHO05D003262 4.3e-25 117.9 71 74.6
Aqoxy1G00357 Aquilegia oxysepala HOM05D002775 ORTHO05D003262 5.6e-25 117.5 70 75.7
Lj1A1096T60 Lonicera japonica HOM05D002775 ORTHO05D003262 5.6e-25 117.5 75 69.3
Lj1A1098T77 Lonicera japonica HOM05D002775 ORTHO05D003262 5.6e-25 117.5 75 69.3
Lalb_Chr20g0110181 Lupinus albus HOM05D002775 ORTHO05D003262 5.6e-25 117.5 71 70.4
Medtr7g090370 Medicago truncatula HOM05D002775 ORTHO05D003262 5.6e-25 117.5 71 71.8
vmacro07805 Vaccinium macrocarpon HOM05D002775 ORTHO05D003262 5.6e-25 117.5 75 70.7
ATR0745G031 Amborella trichopoda HOM05D002775 ORTHO05D003262 7.3e-25 117.1 77 67.5
CiPaw.10G039500 Carya illinoinensis HOM05D002775 ORTHO05D003262 7.3e-25 117.1 76 65.8
COL.COLO4_20629 Corchorus olitorius HOM05D002775 ORTHO05D003262 7.3e-25 117.1 79 67.1
ECA247G0461 Erigeron canadensis HOM05D002775 ORTHO05D003262 7.3e-25 117.1 69 73.9
Psat3g077120 Pisum sativum HOM05D002775 ORTHO05D003262 7.3e-25 117.1 71 71.8
Hma1.2p1_0553F.1_g177770 Hydrangea macrophylla HOM05D002775 ORTHO05D003262 9.5e-25 116.7 75 70.7
Actinidia09266 Actinidia chinensis HOM05D002775 ORTHO05D003262 1.2e-24 116.3 71 73.2
Actinidia17943 Actinidia chinensis HOM05D002775 ORTHO05D003262 1.2e-24 116.3 71 73.2
Gohir.A11G307800 Gossypium hirsutum HOM05D002775 ORTHO05D003262 1.6e-24 115.9 76 68.4
Gohir.D11G323200 Gossypium hirsutum HOM05D002775 ORTHO05D003262 1.6e-24 115.9 76 68.4
Gorai.007G353200 Gossypium raimondii HOM05D002775 ORTHO05D003262 1.6e-24 115.9 76 68.4
Lsat_1_v5_gn_9_29601 Lactuca sativa HOM05D002775 ORTHO05D003262 2.1e-24 115.5 89 62.9
Thecc.05G137200 Theobroma cacao HOM05D002775 ORTHO05D003262 2.1e-24 115.5 76 67.1
TPR.G32736 Trifolium pratense HOM05D002775 ORTHO05D003262 2.1e-24 115.5 71 71.8
TWI77G0151 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 2.1e-24 115.5 71 73.2
CSS0046294 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 4.7e-24 114.4 72 70.8
Rhsim03G0040300 Rhododendron simsii HOM05D002775 ORTHO05D003262 4.7e-24 114.4 75 69.3
TWI74G0453 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 4.7e-24 114.4 71 70.4
AUR62030347 Chenopodium quinoa HOM05D002775 ORTHO05D003262 6.2e-24 114.0 72 73.6
AUR62040835 Chenopodium quinoa HOM05D002775 ORTHO05D003262 6.2e-24 114.0 72 73.6
Oeu059333.1 Olea europaea HOM05D002775 ORTHO05D003262 8.1e-24 113.6 71 70.4
HanXRQChr10g0292571 Helianthus annuus HOM05D002775 ORTHO05D003262 1.1e-23 113.2 69 73.9
Hund19104 Selenicereus undatus HOM05D002775 ORTHO05D003262 1.1e-23 113.2 83 67.5
Cc06_g18960 Coffea canephora HOM05D002775 ORTHO05D003262 1.4e-23 112.8 71 71.8
MSTRG.6374 Avicennia marina HOM05D002775 ORTHO05D003262 1.8e-23 112.5 75 69.3
Migut.J01666 Erythranthe guttata HOM05D002775 ORTHO05D003262 1.8e-23 112.5 75 69.3
PGSC0003DMG400029856 Solanum tuberosum HOM05D002775 ORTHO05D003262 1.8e-23 112.5 89 60.7
SalBow6G1070 Salvia bowleyana HOM05D002775 ORTHO05D003262 2.3e-23 112.1 87 63.2
Dinv09473 Davidia involucrata HOM05D002775 ORTHO05D003262 3.1e-23 111.7 75 68.0
Dinv15939 Davidia involucrata HOM05D002775 ORTHO05D003262 3.1e-23 111.7 75 68.0
DCAR_020560 Daucus carota HOM05D002775 ORTHO05D003262 4.0e-23 111.3 70 71.4
EL10Ac3g07198 Beta vulgaris HOM05D002775 ORTHO05D003262 5.2e-23 110.9 72 72.2
Nitab4.5_0000515g0010 Nicotiana tabacum HOM05D002775 ORTHO05D003262 5.2e-23 110.9 71 70.4
Nitab4.5_0006876g0030 Nicotiana tabacum HOM05D002775 ORTHO05D003262 5.2e-23 110.9 71 70.4
Sc19g0008240 Simmondsia chinensis HOM05D002775 ORTHO05D003262 5.2e-23 110.9 91 61.5
Duzib128G1018 Durio zibethinus HOM05D002775 ORTHO05D003262 6.8e-23 110.5 76 65.8
PSO384G3781 Papaver somniferum HOM05D002775 ORTHO05D003262 6.8e-23 110.5 72 70.8
Peaxi162Scf00903g00213 Petunia axillaris HOM05D002775 ORTHO05D003262 6.8e-23 110.5 71 70.4
Solyc10g079620.2 Solanum lycopersicum HOM05D002775 ORTHO05D003262 2.6e-22 108.6 71 69.0
CSS0019588 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 3.4e-22 108.2 87 58.6
Sopen10g030260 Solanum pennellii HOM05D002775 ORTHO05D003262 3.4e-22 108.2 71 69.0
SHI13495 Sapria himalayana HOM05D002775 ORTHO05D003262 4.4e-22 107.8 70 72.9
SEGI_04308 Sequoiadendron giganteum HOM05D002775 ORTHO05D003262 2.9e-21 105.1 69 68.1
Ah.13g076910 Amaranthus hybridus HOM05D002775 ORTHO05D003262 3.7e-21 104.8 77 63.6
SMO232G0103 Selaginella moellendorffii HOM05D002775 ORTHO05D003262 1.4e-20 102.8 99 53.5
unitig_8.g4554 Utricularia gibba HOM05D002775 ORTHO05D003262 3.2e-20 101.7 68 66.2
Ca_08411_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 9.2e-20 100.1 71 66.2
Ca_27752_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 9.2e-20 100.1 71 66.2
CSS0003680 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 1.2e-19 99.8 76 60.5
Rhsim03G0102000 Rhododendron simsii HOM05D002775 ORTHO05D003262 1.9e-17 92.4 75 58.7
CBR_g11177 Chara braunii HOM05D002775 ORTHO05D003262 3.5e-11 71.6 57 59.6
GSVIVG01033613001 Vitis vinifera HOM05D002775 ORTHO05D003262 5.6e-09 64.3 37 75.7
Cpa.g.sc3597.2 Carica papaya HOM05D002775 ORTHO05D003262 6.2e-08 60.8 42 59.5
Cre09.g403750 Chlamydomonas reinhardtii HOM05D002775 ORTHO05D003262 5.3e-07 57.8 56 44.6
Mapoly0061s0059 Marchantia polymorpha HOM05D002775 ORTHO05D003262 9.0e-07 57.0 58 43.1
Dinv34372 Davidia involucrata HOM05D002775 ORTHO05D003262 1.2e-06 56.6 40 60.0
SMO118G0366 Selaginella moellendorffii HOM05D002775 ORTHO05D003262 5.8e-06 54.3 51 45.1


User provided reference genes

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