Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0333800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 5.5e-253 877.1 422 100.0
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.9e-52 210.3 381 40.7
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.5e-48 197.2 395 37.2
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.2e-39 166.0 407 31.9
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 2.4e-38 164.1 410 32.4
Os01g0244400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 3.9e-33 146.7 387 32.8
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.9e-32 144.4 366 31.4
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 2.1e-31 141.0 380 29.5
Os01g0240700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.8e-30 137.9 418 30.9
Os01g0244150 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.9e-30 136.0 276 37.0
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 1.2e-29 135.2 396 27.5
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 8.4e-28 129.0 371 29.9
Zm00001eb240250 Zea mays HOM05D009075 ORTHO05D011069 1.0e-25 122.1 407 30.5
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 6.7e-25 119.4 345 27.8
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 8.7e-25 119.0 382 28.8
Os03g0111600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 9.6e-24 115.5 371 31.8
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 4.0e-22 110.2 366 28.1
Os05g0269100 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.5e-21 106.7 297 28.3
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 3.8e-20 103.6 207 36.2
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 3.0e-17 94.0 243 32.5
Os01g0240600 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.6e-15 88.2 273 31.9
Os05g0468400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.1e-14 85.5 386 27.5
Os05g0467400 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.1e-14 83.6 348 25.6
Os06g0161400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D301815 4.1e-14 83.6 358 25.1
Zm00001eb234910 Zea mays HOM05D009075 ORTHO05D011069 5.0e-12 76.6 176 29.5
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.9e-11 74.7 281 24.9
Zm00001eb083090 Zea mays HOM05D009075 ORTHO05D011069 7.9e-10 69.3 270 28.1
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.0e-09 68.9 261 27.2
Os05g0468200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 8.8e-09 65.9 110 35.5
Os05g0250200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 3.3e-08 63.9 170 28.2
Os01g0245000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.3e-08 63.5 115 38.3
Os05g0468100 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 4.3e-08 63.5 116 35.3
Os05g0467900 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 7.4e-08 62.8 99 37.4
Os05g0250000 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.7e-07 61.6 106 34.9
Os05g0251200 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.4e-06 58.5 90 33.3
PGSC0003DMG400002644 Solanum tuberosum HOM05D008898 ORTHO05D001155 3.1e-06 57.4 153 27.5


User provided reference genes

Program Settings