Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0308700 Oryza sativa ssp. japonica HOM05D006335 ORTHO05D007617 6.0e-178 627.9 435 100.0
Zm00001eb014800 Zea mays HOM05D006335 ORTHO05D007617 5.1e-44 183.0 137 68.6
Os03g0308600 Oryza sativa ssp. japonica HOM05D006335 ORTHO05D007617 4.0e-17 93.6 112 46.4
Zm00001eb014790 Zea mays HOM05D006335 ORTHO05D007617 6.5e-15 86.3 145 42.8
GSVIVG01034999001 Vitis vinifera HOM05D006335 ORTHO05D007617 2.1e-13 81.3 140 35.0
Aqoxy2G02728 Aquilegia oxysepala HOM05D006335 ORTHO05D007617 2.8e-10 70.9 102 38.2
AL1G16330 Arabidopsis lyrata HOM05D006335 ORTHO05D007617 1.4e-09 68.6 139 32.4
Carub.0001s0568 Capsella rubella HOM05D006335 ORTHO05D007617 3.1e-09 67.4 101 38.6
Dinv15181 Davidia involucrata HOM05D006335 ORTHO05D007617 5.3e-09 66.6 99 41.4
Thecc.04G299900 Theobroma cacao HOM05D006335 ORTHO05D007617 5.3e-09 66.6 116 34.5
CARHR005880 Cardamine hirsuta HOM05D006335 ORTHO05D007617 9.0e-09 65.9 153 35.9
Nn4g25571 Nelumbo nucifera HOM05D006335 ORTHO05D007617 9.0e-09 65.9 96 40.6
C08p02480 Brassica napus HOM05D006335 ORTHO05D007617 1.5e-08 65.1 148 32.4
FvH4_6g27220 Fragaria vesca HOM05D006335 ORTHO05D007617 3.4e-08 63.9 105 40.0
FAN14G0983 Fragaria x ananassa HOM05D006335 ORTHO05D007617 3.4e-08 63.9 105 40.0
TAR633G2592 Trochodendron aralioides HOM05D006335 ORTHO05D007617 4.5e-08 63.5 111 36.9
BcaC07g36801 Brassica carinata HOM05D006335 ORTHO05D007617 1.0e-07 62.4 148 31.8
A08p36030 Brassica napus HOM05D006335 ORTHO05D007617 1.0e-07 62.4 158 31.0
BcaB03g13422 Brassica carinata HOM05D006335 ORTHO05D007617 1.3e-07 62.0 107 36.4
BraA08t35509Z Brassica rapa HOM05D006335 ORTHO05D007617 1.3e-07 62.0 158 31.0
FAN05G4039 Fragaria x ananassa HOM05D006335 ORTHO05D007617 1.3e-07 62.0 105 39.0
Aqoxy1G02076 Aquilegia oxysepala HOM05D006335 ORTHO05D007617 1.7e-07 61.6 104 37.5
RcHm_v2.0_Chr2g0129291 Rosa chinensis HOM05D006335 ORTHO05D007617 1.7e-07 61.6 110 38.2
AT1G06320 Arabidopsis thaliana HOM05D006335 ORTHO05D007617 2.2e-07 61.2 137 29.2
BolC8t47040H Brassica oleracea HOM05D006335 ORTHO05D007617 2.2e-07 61.2 155 31.0
EL10Ac3g05494 Beta vulgaris HOM05D006335 ORTHO05D007617 2.9e-07 60.8 110 36.4
Thhalv10009758m.g Eutrema salsugineum HOM05D006335 ORTHO05D007617 3.8e-07 60.5 99 38.4
Cc05_g08270 Coffea canephora HOM05D006335 ORTHO05D007617 5.0e-07 60.1 110 36.4
BcaC07g42074 Brassica carinata HOM05D006335 ORTHO05D007617 8.4e-07 59.3 124 34.7
FAN09G0462 Fragaria x ananassa HOM05D006335 ORTHO05D007617 8.4e-07 59.3 105 37.1
TAR626G0568 Trochodendron aralioides HOM05D006335 ORTHO05D007617 8.4e-07 59.3 99 36.4
C08p51300 Brassica napus HOM05D006335 ORTHO05D007617 1.1e-06 58.9 109 34.9
BolC8t52656H Brassica oleracea HOM05D006335 ORTHO05D007617 1.1e-06 58.9 109 34.9
Sp1g05110 Schrenkiella parvula HOM05D006335 ORTHO05D007617 1.1e-06 58.9 99 35.4
Hund03123 Selenicereus undatus HOM05D006335 ORTHO05D007617 1.1e-06 58.9 115 33.9
CiPaw.04G132900 Carya illinoinensis HOM05D006335 ORTHO05D007617 1.9e-06 58.2 118 33.9
QL08p041551 Quercus lobata HOM05D006335 ORTHO05D007617 1.9e-06 58.2 145 31.0
TAR624G0615 Trochodendron aralioides HOM05D006335 ORTHO05D007617 3.2e-06 57.4 101 38.6
FvH4_6g27231 Fragaria vesca HOM05D006335 ORTHO05D007617 4.2e-06 57.0 85 42.4
Phvul.011G131000 Phaseolus vulgaris HOM05D006335 ORTHO05D007617 4.2e-06 57.0 137 31.4
CANSAT64G2990 Cannabis sativa HOM05D006335 ORTHO05D007617 5.5e-06 56.6 136 30.9
Phvul.011G133000 Phaseolus vulgaris HOM05D006335 ORTHO05D007617 7.2e-06 56.2 137 30.7
VMungo1127G1825 Vigna mungo HOM05D006335 ORTHO05D007617 7.2e-06 56.2 137 29.9


User provided reference genes

Program Settings