Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.4e-111 406.4 221 100.0
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 5.1e-93 344.7 225 87.1
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 3.3e-92 342.0 225 85.8
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 3.7e-67 258.8 219 60.3
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 2.4e-66 256.1 199 63.3
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 5.3e-66 255.0 199 64.8
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 5.3e-66 255.0 192 65.6
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 7.0e-66 254.6 208 67.3
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 9.1e-66 254.2 210 69.0
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 9.1e-66 254.2 204 66.2
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 1.2e-65 253.8 213 64.8
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 1.2e-65 253.8 185 71.4
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 2.0e-65 253.1 199 63.8
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 2.0e-65 253.1 201 70.1
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 2.6e-65 252.7 218 63.3
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 3.5e-65 252.3 188 65.4
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 3.5e-65 252.3 217 66.8
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 4.5e-65 251.9 216 61.6
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 4.5e-65 251.9 216 61.6
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 4.5e-65 251.9 185 71.4
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 4.5e-65 251.9 229 59.8
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 5.9e-65 251.5 216 61.1
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 1.0e-64 250.8 210 61.4
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.0e-64 250.8 186 65.6
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 1.3e-64 250.4 216 63.0
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.3e-64 250.4 223 64.6
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 1.7e-64 250.0 195 63.6
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 2.9e-64 249.2 207 66.7
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 2.9e-64 249.2 228 60.1
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 3.8e-64 248.8 189 70.9
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 3.8e-64 248.8 209 67.5
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 6.5e-64 248.1 208 64.4
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.5e-64 248.1 208 61.1
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 8.5e-64 247.7 223 57.4
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 1.1e-63 247.3 207 63.8
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 1.1e-63 247.3 207 66.2
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 1.1e-63 247.3 207 63.8
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 1.1e-63 247.3 207 66.2
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 1.5e-63 246.9 221 64.7
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 1.5e-63 246.9 211 64.5
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 1.5e-63 246.9 207 62.3
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.9e-63 246.5 191 63.9
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.9e-63 246.5 209 66.0
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 2.5e-63 246.1 193 63.2
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 2.5e-63 246.1 193 63.2
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 3.2e-63 245.7 181 70.7
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 3.2e-63 245.7 211 64.0
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 3.2e-63 245.7 211 60.7
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 3.2e-63 245.7 230 58.3
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 3.2e-63 245.7 186 66.7
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 4.2e-63 245.4 198 66.2
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 5.5e-63 245.0 206 59.7
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 5.5e-63 245.0 216 66.2
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 5.5e-63 245.0 204 64.7
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 5.5e-63 245.0 230 58.3
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 7.2e-63 244.6 200 61.5
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 7.2e-63 244.6 181 69.1
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 7.2e-63 244.6 191 70.2
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 7.2e-63 244.6 227 57.7
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 1.2e-62 243.8 182 64.8
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 1.2e-62 243.8 194 69.6
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.2e-62 243.8 194 62.4
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.6e-62 243.4 200 61.0
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 2.1e-62 243.0 203 66.5
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 2.1e-62 243.0 183 63.9
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 2.7e-62 242.7 233 57.5
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 2.7e-62 242.7 233 61.8
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 2.7e-62 242.7 216 63.4
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 3.6e-62 242.3 202 65.8
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 3.6e-62 242.3 203 66.5
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 4.7e-62 241.9 231 55.8
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 4.7e-62 241.9 207 59.9
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 6.1e-62 241.5 210 64.8
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 6.1e-62 241.5 182 63.7
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 8.0e-62 241.1 203 66.0
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 8.0e-62 241.1 187 67.9
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 1.0e-61 240.7 223 63.7
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 1.4e-61 240.4 232 55.2
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.8e-61 240.0 231 57.1
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.8e-61 240.0 186 60.8
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 3.0e-61 239.2 221 60.2
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 4.0e-61 238.8 208 63.9
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 5.2e-61 238.4 183 62.8
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 5.2e-61 238.4 203 66.0
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 5.2e-61 238.4 209 61.7
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 6.7e-61 238.0 223 61.9
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 8.8e-61 237.7 230 59.1
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 1.1e-60 237.3 199 65.3
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 1.1e-60 237.3 197 63.5
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 1.5e-60 236.9 180 69.4
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 1.5e-60 236.9 182 70.3
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 1.5e-60 236.9 209 57.4
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 3.3e-60 235.7 175 66.3
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.3e-60 235.7 226 54.9
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.3e-60 235.7 226 54.9
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 3.3e-60 235.7 218 58.7
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 4.4e-60 235.3 195 64.1
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 4.4e-60 235.3 177 71.8
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 3.7e-59 232.3 215 61.9
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 3.7e-59 232.3 180 69.4
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 6.3e-59 231.5 190 62.6
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 5.3e-58 228.4 207 61.4
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.6e-57 226.9 186 65.6
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 5.9e-57 224.9 234 51.3
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 4.4e-52 208.8 225 57.3
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 5.7e-52 208.4 140 70.7
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 1.8e-45 186.8 149 61.7
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.1e-42 177.6 137 62.8
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 3.5e-41 172.6 141 58.2
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 4.5e-41 172.2 140 60.7
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 7.7e-41 171.4 138 61.6
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 1.7e-40 170.2 143 59.4
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.7e-40 170.2 140 59.3
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.3e-40 169.9 140 59.3
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 3.8e-40 169.1 140 58.6
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 3.8e-40 169.1 140 58.6
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 3.8e-40 169.1 140 58.6
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 3.8e-40 169.1 140 58.6
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 5.0e-40 168.7 140 58.6
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 5.0e-40 168.7 140 58.6
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.1e-39 167.5 140 57.9
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 2.5e-39 166.4 140 58.6
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 4.3e-39 165.6 140 57.9
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 7.3e-39 164.9 143 54.5
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 3.6e-38 162.5 103 75.7
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 4.7e-38 162.2 185 50.8
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 4.7e-38 162.2 157 52.9
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 3.7e-35 152.5 167 48.5
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-32 141.7 109 72.5
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 1.8e-29 133.7 228 39.0
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 1.1e-26 124.4 108 64.8
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.7e-24 117.1 152 43.4
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 1.1e-23 114.4 132 56.1
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.1e-23 114.4 171 38.0
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 2.5e-23 113.2 158 38.6
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.8e-22 109.8 151 39.1
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 2.0e-20 103.6 84 60.7
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.7e-19 99.4 127 45.7
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 2.4e-18 96.7 228 36.8
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 4.6e-17 92.4 66 69.7
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 6.0e-17 92.0 90 52.2
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 5.1e-16 89.0 167 31.7
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 6.6e-16 88.6 196 29.6
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 6.6e-16 88.6 171 31.6
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 6.6e-16 88.6 72 54.2
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.6e-12 76.6 101 42.6
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 1.3e-11 74.3 65 60.0
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 1.7e-11 73.9 190 34.7
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 4.1e-10 69.3 95 47.4
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 5.1e-08 62.4 64 50.0


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