Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 4.1e-107 391.7 248 100.0
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 2.9e-76 289.3 226 75.7
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 4.0e-38 162.5 221 43.0
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 6.9e-38 161.8 163 51.5
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 1.5e-37 160.6 161 52.2
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 3.4e-37 159.5 213 45.5
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 7.6e-37 158.3 212 44.3
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.9e-36 156.4 157 50.3
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 1.2e-34 151.0 159 49.1
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 1.2e-34 151.0 159 49.1
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.6e-34 150.6 209 43.5
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.6e-34 150.6 216 40.3
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 1.6e-34 150.6 220 42.7
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 2.1e-34 150.2 222 44.6
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 2.7e-34 149.8 229 45.9
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.7e-34 149.8 229 45.9
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.7e-34 149.8 212 41.5
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 2.7e-34 149.8 212 41.5
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 4.6e-34 149.1 228 45.2
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 4.6e-34 149.1 215 45.1
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 6.0e-34 148.7 206 44.2
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.0e-33 147.9 215 48.8
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.0e-33 147.9 215 48.8
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 1.0e-33 147.9 158 50.0
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.3e-33 147.5 211 42.2
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 1.8e-33 147.1 215 43.7
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.8e-33 147.1 215 48.8
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.8e-33 147.1 224 38.8
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 1.8e-33 147.1 158 49.4
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.8e-33 147.1 221 40.7
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 2.3e-33 146.7 225 40.4
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 3.0e-33 146.4 213 41.3
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 3.0e-33 146.4 163 45.4
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 3.9e-33 146.0 224 42.0
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 5.1e-33 145.6 219 43.8
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 5.1e-33 145.6 231 42.4
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 5.1e-33 145.6 156 46.2
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 6.7e-33 145.2 221 45.7
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 6.7e-33 145.2 160 48.1
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 8.7e-33 144.8 213 38.0
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 1.1e-32 144.4 212 47.6
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 1.5e-32 144.1 163 50.9
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 1.5e-32 144.1 214 42.5
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 1.9e-32 143.7 157 47.1
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 1.9e-32 143.7 156 47.4
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.9e-32 143.7 159 47.2
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 2.5e-32 143.3 218 39.0
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 2.5e-32 143.3 223 38.6
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 3.3e-32 142.9 161 46.6
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 3.3e-32 142.9 217 38.7
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 4.3e-32 142.5 158 46.2
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 4.3e-32 142.5 214 47.2
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 4.3e-32 142.5 221 39.4
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 4.3e-32 142.5 216 43.5
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 5.6e-32 142.1 217 39.2
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 5.6e-32 142.1 218 38.5
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 5.6e-32 142.1 220 44.5
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 5.6e-32 142.1 168 47.0
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 7.4e-32 141.7 217 39.2
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 7.4e-32 141.7 164 48.8
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 7.4e-32 141.7 158 45.6
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 7.4e-32 141.7 216 43.5
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 7.4e-32 141.7 212 40.1
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 7.4e-32 141.7 215 39.5
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 9.6e-32 141.4 224 41.5
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 9.6e-32 141.4 151 47.7
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 1.6e-31 140.6 164 48.2
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 2.1e-31 140.2 220 39.1
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 2.1e-31 140.2 218 44.5
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 2.8e-31 139.8 168 51.2
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 2.8e-31 139.8 214 40.2
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 3.7e-31 139.4 227 40.1
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 3.7e-31 139.4 222 37.8
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 3.7e-31 139.4 222 37.8
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 3.7e-31 139.4 239 39.3
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 6.2e-31 138.7 217 41.0
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 6.2e-31 138.7 222 37.8
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 8.2e-31 138.3 213 38.5
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 1.1e-30 137.9 217 39.2
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 1.1e-30 137.9 211 39.3
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 1.1e-30 137.9 221 41.2
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 1.4e-30 137.5 161 47.8
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.4e-30 137.5 214 40.7
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 1.8e-30 137.1 213 42.3
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 1.8e-30 137.1 159 49.1
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 3.1e-30 136.3 163 44.2
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 3.1e-30 136.3 216 39.8
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 4.0e-30 136.0 218 40.8
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 4.0e-30 136.0 159 44.0
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 5.3e-30 135.6 214 39.7
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 5.3e-30 135.6 220 40.5
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 6.9e-30 135.2 214 37.9
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 6.9e-30 135.2 160 46.2
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 9.0e-30 134.8 221 39.8
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 9.0e-30 134.8 212 38.7
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 1.5e-29 134.0 154 48.7
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 1.5e-29 134.0 218 43.1
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.5e-29 134.0 156 46.2
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 2.0e-29 133.7 148 46.6
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 3.4e-29 132.9 202 38.6
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 3.4e-29 132.9 218 37.2
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 3.4e-29 132.9 217 39.2
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 3.4e-29 132.9 167 39.5
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 4.5e-29 132.5 219 44.7
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 7.6e-29 131.7 217 37.3
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 7.6e-29 131.7 156 45.5
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 1.3e-28 131.0 167 44.9
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 1.3e-28 131.0 213 40.8
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 1.3e-28 131.0 213 40.8
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.3e-28 131.0 153 46.4
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.3e-28 131.0 159 43.4
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.3e-28 131.0 156 46.8
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 1.7e-28 130.6 215 41.4
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 4.9e-28 129.0 215 40.0
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 4.9e-28 129.0 159 45.9
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 2.5e-27 126.7 153 41.8
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 1.2e-26 124.4 148 43.9
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 3.5e-26 122.9 159 43.4
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.3e-25 120.9 132 47.7
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 3.0e-25 119.8 162 37.7
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 6.7e-25 118.6 85 60.0
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 1.5e-24 117.5 85 60.0
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 1.6e-23 114.0 76 65.8
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 1.6e-23 114.0 224 35.3
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 4.8e-23 112.5 88 54.5
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 3.1e-22 109.8 83 55.4
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.0e-21 107.1 150 40.7
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 2.0e-21 107.1 115 43.5
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 2.6e-21 106.7 84 52.4
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 1.0e-20 104.8 71 64.8
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 1.3e-20 104.4 186 35.5
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 1.7e-20 104.0 231 31.2
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 2.2e-20 103.6 186 34.9
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 5.0e-20 102.4 85 48.2
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 8.5e-20 101.7 93 53.8
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 4.2e-19 99.4 98 44.9
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 7.2e-19 98.6 131 45.8
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 2.1e-18 97.1 63 60.3
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 6.1e-18 95.5 78 48.7
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 6.1e-18 95.5 131 45.0
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 3.9e-17 92.8 96 47.9
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.5e-16 90.9 87 49.4
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 4.3e-16 89.4 87 48.3
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.3e-15 87.8 87 48.3
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 2.6e-13 80.1 79 45.6
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 7.2e-11 72.0 130 37.7
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 4.7e-10 69.3 85 43.5
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 3.9e-09 66.2 74 40.5
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 6.7e-09 65.5 118 38.1
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 1.1e-08 64.7 107 36.4
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 1.1e-08 64.7 32 78.1
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 7.4e-08 62.0 130 30.8
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 2.8e-07 60.1 115 36.5


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