Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0265666 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 8.1e-39 163.7 111 100.0
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 1.9e-16 89.4 92 62.0
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 7.9e-10 67.4 91 47.3
HPP92_018039 Vanilla planifolia HOM05D003771 ORTHO05D004396 1.0e-09 67.0 91 54.9
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 3.9e-09 65.1 95 49.5
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 8.8e-09 63.9 91 47.3
TAR633G1498 Trochodendron aralioides HOM05D003771 ORTHO05D004396 8.8e-09 63.9 91 47.3
vmacro20746 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 8.8e-09 63.9 93 59.1
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 1.1e-08 63.5 94 61.7
CDE06G2293 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 1.9e-08 62.8 93 47.3
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 7.4e-08 60.8 87 44.8
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 7.4e-08 60.8 87 44.8
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 9.7e-08 60.5 92 58.7
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 1.7e-07 59.7 92 45.7
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 2.8e-07 58.9 94 60.6
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 3.7e-07 58.5 92 57.6
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 4.8e-07 58.2 97 55.7
MBI14_g32940_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D004396 8.2e-07 57.4 97 55.7
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 1.1e-06 57.0 97 53.6
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 1.1e-06 57.0 93 62.4
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 1.1e-06 57.0 90 57.8
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 1.4e-06 56.6 92 63.0
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 1.8e-06 56.2 90 61.1
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 2.4e-06 55.8 73 64.4
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 3.1e-06 55.5 92 55.4
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 4.1e-06 55.1 92 45.7
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 5.3e-06 54.7 98 61.2
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 5.3e-06 54.7 92 51.1
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 5.3e-06 54.7 92 59.8
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 6.9e-06 54.3 92 62.0
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 6.9e-06 54.3 92 55.4
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 6.9e-06 54.3 92 56.5


User provided reference genes

Program Settings