Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 0.0e+00 1334.3 649 100.0
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 7.1e-284 980.3 620 79.5
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 1.0e-202 710.7 660 58.5
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 8.6e-181 637.9 608 56.9
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 2.5e-180 636.3 587 57.4
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 7.3e-180 634.8 686 53.5
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 7.3e-180 634.8 632 54.7
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 1.6e-179 633.6 587 57.8
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 2.8e-179 632.9 667 53.8
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 3.6e-179 632.5 657 53.9
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 4.7e-179 632.1 615 55.6
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 6.2e-179 631.7 665 54.1
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 8.0e-179 631.3 664 53.2
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 2.3e-178 629.8 664 53.0
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 3.1e-178 629.4 675 52.0
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 5.2e-178 628.6 663 52.8
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 7.5e-177 624.8 585 57.4
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 2.2e-176 623.2 676 51.6
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 2.9e-176 622.9 587 56.6
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 2.9e-176 622.9 658 52.9
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 2.9e-176 622.9 656 53.0
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 4.9e-176 622.1 665 53.5
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 1.1e-175 620.9 625 53.9
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 1.1e-175 620.9 603 54.7
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 1.4e-175 620.5 591 56.5
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 1.4e-175 620.5 586 55.8
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 1.4e-175 620.5 604 55.6
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 3.2e-175 619.4 651 52.4
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 3.2e-175 619.4 586 55.6
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 7.0e-175 618.2 606 55.1
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 7.0e-175 618.2 651 52.4
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 7.0e-175 618.2 651 52.4
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 9.2e-175 617.8 589 56.0
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 2.0e-174 616.7 583 56.8
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.0e-174 616.7 651 52.2
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 2.7e-174 616.3 662 51.7
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 2.7e-174 616.3 625 53.3
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 2.7e-174 616.3 625 53.3
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 6.0e-174 615.1 586 56.3
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.0e-174 615.1 640 53.0
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.0e-174 615.1 651 52.2
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 7.8e-174 614.8 588 56.3
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 1.3e-173 614.0 590 55.3
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 1.7e-173 613.6 636 53.1
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 3.9e-173 612.5 651 51.8
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 5.0e-173 612.1 652 53.2
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 6.6e-173 611.7 674 53.0
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 1.1e-172 610.9 657 52.2
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 1.1e-172 610.9 655 52.4
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 1.1e-172 610.9 651 52.5
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 1.9e-172 610.1 565 57.0
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 1.9e-172 610.1 590 55.4
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 3.3e-172 609.4 582 56.0
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 4.3e-172 609.0 672 50.9
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 7.3e-172 608.2 588 55.3
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 7.3e-172 608.2 590 57.6
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 7.3e-172 608.2 659 52.5
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 9.5e-172 607.8 588 55.3
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 4.7e-171 605.5 655 51.6
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 1.8e-170 603.6 587 54.5
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 2.3e-170 603.2 587 55.2
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 3.1e-170 602.8 592 54.6
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 3.1e-170 602.8 653 52.1
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 4.0e-170 602.4 587 56.2
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 4.0e-170 602.4 590 57.3
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 5.2e-170 602.1 659 53.6
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 6.8e-170 601.7 640 52.2
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 8.9e-170 601.3 665 51.6
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 5.8e-169 598.6 624 52.6
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 3.7e-168 595.9 654 52.1
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 4.9e-168 595.5 665 51.1
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 6.4e-168 595.1 667 51.6
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 8.3e-168 594.7 662 51.7
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 1.9e-167 593.6 657 51.6
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 3.2e-167 592.8 661 53.4
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 4.1e-167 592.4 602 54.5
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 1.6e-166 590.5 584 55.1
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 2.1e-166 590.1 597 54.8
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 2.7e-166 589.7 643 50.5
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 2.7e-166 589.7 653 51.6
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 2.7e-166 589.7 653 51.6
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 2.7e-166 589.7 653 51.6
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 6.0e-166 588.6 660 52.0
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 1.3e-165 587.4 589 54.3
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 1.3e-165 587.4 587 55.5
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 6.6e-165 585.1 568 55.1
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 8.6e-165 584.7 599 54.1
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 4.3e-164 582.4 587 54.0
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 7.3e-164 581.6 645 52.1
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.2e-163 580.9 590 53.2
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 4.7e-163 578.9 665 50.7
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 8.1e-163 578.2 680 49.7
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 8.1e-163 578.2 540 57.0
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 2.3e-162 576.6 649 51.5
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 4.0e-162 575.9 645 50.7
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 1.5e-161 573.9 593 53.0
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 2.6e-161 573.2 593 52.8
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 1.7e-160 570.5 606 53.0
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 2.9e-160 569.7 587 52.1
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 3.2e-159 566.2 622 52.1
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 3.2e-159 566.2 590 52.9
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 1.2e-158 564.3 593 52.1
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 6.0e-158 562.0 552 55.1
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 1.0e-157 561.2 633 49.9
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 1.3e-157 560.8 597 52.3
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 3.9e-157 559.3 603 52.7
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 3.9e-157 559.3 603 52.7
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 3.9e-157 559.3 603 52.7
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 5.6e-156 555.4 585 53.2
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.6e-155 553.9 664 49.4
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 1.5e-153 547.4 522 55.4
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 3.4e-153 546.2 599 50.6
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 7.6e-153 545.0 592 50.5
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 7.6e-153 545.0 670 47.8
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 2.2e-152 543.5 613 51.2
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 9.3e-151 538.1 656 47.7
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 1.6e-150 537.3 572 53.8
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 1.5e-148 530.8 567 51.9
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 2.8e-147 526.6 579 50.4
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 1.5e-137 494.2 577 50.8
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 5.1e-133 479.2 588 47.1
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 8.7e-133 478.4 591 47.0
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 3.8e-128 463.0 608 44.4
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 3.2e-127 459.9 386 63.0
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 2.1e-126 457.2 511 50.7
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 4.8e-123 446.0 461 52.1
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 4.1e-122 443.0 635 44.1
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 3.0e-117 426.8 414 54.8
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 1.5e-116 424.5 421 53.0
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 2.7e-110 403.7 397 53.1
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 6.5e-88 329.3 369 49.1
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 3.0e-85 320.5 226 74.3
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.0e-72 278.9 300 51.0
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 2.0e-65 254.6 375 42.1
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 5.4e-50 203.4 227 48.0
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 8.6e-40 169.5 201 50.2
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 3.3e-31 141.0 316 30.7
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 1.2e-25 122.5 189 37.6
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 2.1e-25 121.7 214 35.0
BcaNung07137 Brassica carinata HOM05D004961 ORTHO05D006258 2.7e-25 121.3 91 68.1
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 1.8e-16 92.0 107 46.7
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 5.1e-16 90.5 177 33.3
BcaNung07139 Brassica carinata HOM05D004961 ORTHO05D006258 1.3e-11 75.9 101 45.5
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 1.9e-10 72.0 171 38.0
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 2.7e-09 68.2 124 39.5
HanXRQChr12g0366651 Helianthus annuus HOM05D001845 ORTHO05D001878 9.7e-07 59.7 44 63.6


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