Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0201400 Oryza sativa ssp. japonica HOM05D005287 ORTHO05D006893 4.2e-153 546.2 797 100.0
Zm00001eb007770 Zea mays HOM05D005287 ORTHO05D006893 1.2e-70 272.3 237 65.8
HPP92_023662 Vanilla planifolia HOM05D023777 ORTHO05D031065 1.4e-15 89.4 115 45.2
HPP92_023661 Vanilla planifolia HOM05D005287 ORTHO05D006893 6.5e-13 80.5 236 32.6
Actinidia38253 Actinidia chinensis HOM05D005287 ORTHO05D006893 2.2e-08 65.5 107 36.4
QL08p056824 Quercus lobata HOM05D005287 ORTHO05D006893 3.7e-08 64.7 103 35.0
ClCG02G013900 Citrullus lanatus HOM05D005287 ORTHO05D006893 1.1e-07 63.2 101 34.7
MBI16_g17961_MAGBIO Magnolia biondii HOM05D005287 ORTHO05D006893 1.8e-07 62.4 75 42.7
Glyma.10G213600 Glycine max HOM05D005287 ORTHO05D006893 4.1e-07 61.2 101 38.6
PSO782G5729 Papaver somniferum HOM05D005287 ORTHO05D006893 4.1e-07 61.2 84 41.7
CANSAT54G2917 Cannabis sativa HOM05D005287 ORTHO05D006893 6.9e-07 60.5 100 37.0
Lalb_Chr06g0171161 Lupinus albus HOM05D005287 ORTHO05D006893 6.9e-07 60.5 216 31.0
RcHm_v2.0_Chr1g0364091 Rosa chinensis HOM05D005287 ORTHO05D006893 9.1e-07 60.1 101 38.6
PSO566G0007 Papaver somniferum HOM05D005287 ORTHO05D006893 1.2e-06 59.7 93 38.7
Lj5g0006814 Lotus japonicus HOM05D005287 ORTHO05D006893 2.0e-06 58.9 103 38.8
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 2.6e-06 58.5 83 43.4
Rhsim06G0174700 Rhododendron simsii HOM05D005287 ORTHO05D006893 2.6e-06 58.5 111 35.1
TAR628G1500 Trochodendron aralioides HOM05D005287 ORTHO05D006893 3.4e-06 58.2 90 37.8
TAR376G0736 Trochodendron aralioides HOM05D005287 ORTHO05D006893 4.5e-06 57.8 97 38.1
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 5.9e-06 57.4 101 35.6
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 5.9e-06 57.4 104 35.6
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 7.7e-06 57.0 66 45.5
CSS0048123 Camellia sinensis var. sinensis HOM05D005287 ORTHO05D006893 7.7e-06 57.0 48 52.1
Cfa001592 Carpinus fangiana HOM05D005287 ORTHO05D006893 7.7e-06 57.0 103 33.0
Dinv11806 Davidia involucrata HOM05D005287 ORTHO05D006893 7.7e-06 57.0 213 28.6
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 7.7e-06 57.0 207 27.1


User provided reference genes

Program Settings