Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 8.9e-50 199.9 97 100.0
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 6.3e-11 70.9 69 58.0
Lsat_1_v5_gn_8_115540 Lactuca sativa HOM05D008620 ORTHO05D011304 1.8e-10 69.3 74 52.7
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 4.1e-10 68.2 70 50.0
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 1.0e-08 63.5 71 46.5
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 1.0e-08 63.5 64 51.6
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.7e-08 62.8 67 50.7
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 2.9e-08 62.0 64 53.1
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 5.0e-08 61.2 67 50.7
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 5.0e-08 61.2 64 53.1
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 5.0e-08 61.2 64 53.1
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 8.5e-08 60.5 64 53.1
unitig_26.g10111 Utricularia gibba HOM05D008620 ORTHO05D011304 5.5e-07 57.8 76 42.1
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 7.2e-07 57.4 67 49.3
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 2.7e-06 55.5 64 50.0
SGA_v2.0_scaffold146G36260 Striga asiatica HOM05D022033 ORTHO05D020747 2.7e-06 55.5 62 46.8
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 2.7e-06 55.5 67 46.3


User provided reference genes

Program Settings