Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0112700 Oryza sativa ssp. japonica HOM05D000706 ORTHO05D293335 1.1e-311 1073.2 833 100.0
Zm00001eb000870 Zea mays HOM05D000706 ORTHO05D001633 5.5e-63 246.9 200 68.0
Zm00001eb404070 Zea mays HOM05D000706 ORTHO05D001633 6.5e-56 223.4 202 64.4
Zm00001eb043720 Zea mays HOM05D000706 ORTHO05D001633 1.3e-27 129.4 505 28.9
Zm00001eb220400 Zea mays HOM05D000706 ORTHO05D001633 1.2e-25 122.9 556 27.0
Os10g0511900 Oryza sativa ssp. japonica HOM05D000706 ORTHO05D300234 2.2e-19 102.1 474 27.0
Manes.01G142800 Manihot esculenta HOM05D000706 ORTHO05D001633 1.7e-08 65.9 188 32.4
Glyma.11G074600 Glycine max HOM05D000706 ORTHO05D001633 5.6e-07 60.8 48 58.3
Lj2g0017487 Lotus japonicus HOM05D000706 ORTHO05D001633 9.5e-07 60.1 41 63.4
Gohir.A03G198900 Gossypium hirsutum HOM05D000706 ORTHO05D001633 1.2e-06 59.7 91 42.9
Gohir.D02G220300 Gossypium hirsutum HOM05D000706 ORTHO05D001633 1.2e-06 59.7 72 47.2
Gorai.005G248200 Gossypium raimondii HOM05D000706 ORTHO05D001633 1.2e-06 59.7 72 47.2
Phvul.002G111600 Phaseolus vulgaris HOM05D000706 ORTHO05D001633 1.6e-06 59.3 104 39.4
Nitab4.5_0000753g0060 Nicotiana tabacum HOM05D000706 ORTHO05D001633 2.1e-06 58.9 87 44.8
Psat2g155760 Pisum sativum HOM05D000706 ORTHO05D001633 2.1e-06 58.9 48 56.2
Hund16475 Selenicereus undatus HOM05D000706 ORTHO05D001633 2.1e-06 58.9 80 42.5
TWI75G0983 Tripterygium wilfordii HOM05D000706 ORTHO05D001633 2.1e-06 58.9 81 40.7
Ca_24897_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001633 3.6e-06 58.2 48 58.3
COL.COLO4_26035 Corchorus olitorius HOM05D000706 ORTHO05D001633 3.6e-06 58.2 77 44.2
RcHm_v2.0_Chr2g0099931 Rosa chinensis HOM05D000706 ORTHO05D001633 3.6e-06 58.2 37 67.6
TPR.G2360 Trifolium pratense HOM05D000706 ORTHO05D001633 3.6e-06 58.2 50 54.0
Duzib052G0725 Durio zibethinus HOM05D000706 ORTHO05D001633 4.7e-06 57.8 78 42.3
Manes.02G101200 Manihot esculenta HOM05D000706 ORTHO05D001633 4.7e-06 57.8 150 32.0
TWI75G1073 Tripterygium wilfordii HOM05D000706 ORTHO05D001633 4.7e-06 57.8 81 39.5
Cfa006940 Carpinus fangiana HOM05D000706 ORTHO05D001633 6.1e-06 57.4 39 64.1
Haze_03809 Corylus avellana HOM05D000706 ORTHO05D001633 6.1e-06 57.4 39 64.1
FvH4_1g12170 Fragaria vesca HOM05D000706 ORTHO05D001633 8.0e-06 57.0 46 58.7
FAN23G0695 Fragaria x ananassa HOM05D000706 ORTHO05D001633 8.0e-06 57.0 46 58.7
FAN26G0297 Fragaria x ananassa HOM05D000706 ORTHO05D001633 8.0e-06 57.0 46 58.7
FAN28G1501 Fragaria x ananassa HOM05D000706 ORTHO05D001633 8.0e-06 57.0 46 58.7
Nitab4.5_0010830g0010 Nicotiana tabacum HOM05D000706 ORTHO05D001633 8.0e-06 57.0 87 43.7
Peaxi162Scf00083g01229 Petunia axillaris HOM05D000706 ORTHO05D001633 8.0e-06 57.0 84 42.9
GSVIVG01018827001 Vitis vinifera HOM05D000706 ORTHO05D001633 8.0e-06 57.0 101 41.6


User provided reference genes

Program Settings