Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0830300 Oryza sativa ssp. japonica HOM05D003231 ORTHO05D299761 0.0e+00 2912.1 1488 100.0
Zm00001eb247840 Zea mays HOM05D003231 ORTHO05D003865 2.8e-09 69.3 211 27.5
TWI63G1568 Tripterygium wilfordii HOM05D003231 ORTHO05D003865 5.3e-08 65.1 216 29.2
Os02g0631000 Oryza sativa ssp. japonica HOM05D003231 ORTHO05D003865 9.0e-08 64.3 213 26.8
Nn7g36616 Nelumbo nucifera HOM05D003231 ORTHO05D003865 1.5e-07 63.5 129 34.1
Os04g0672900 Oryza sativa ssp. japonica HOM05D003231 ORTHO05D003865 2.6e-07 62.8 127 36.2
CsaV3_3G046920 Cucumis sativus L. HOM05D003231 ORTHO05D003865 4.5e-07 62.0 207 30.0
Sabra06G0217400 Salix brachista HOM05D003231 ORTHO05D003865 4.5e-07 62.0 97 36.1
Sed0011155 Sechium edule HOM05D003231 ORTHO05D003865 4.5e-07 62.0 127 33.1
HPP92_002548 Vanilla planifolia HOM05D003231 ORTHO05D003865 5.8e-07 61.6 205 28.3
Zm00001eb066590 Zea mays HOM05D003231 ORTHO05D003865 5.8e-07 61.6 184 31.0
Haze_21690 Corylus avellana HOM05D003231 ORTHO05D003865 7.6e-07 61.2 127 32.3
MELO3C003645.2 Cucumis melo HOM05D003231 ORTHO05D003865 9.9e-07 60.8 207 29.5
TWI32G0035 Tripterygium wilfordii HOM05D003231 ORTHO05D003865 9.9e-07 60.8 216 29.6
Lalb_Chr11g0064081 Lupinus albus HOM05D003231 ORTHO05D003865 1.3e-06 60.5 127 35.4
MBI18_g03888_MAGBIO Magnolia biondii HOM05D003231 ORTHO05D003865 1.7e-06 60.1 204 28.4
Sed0022904 Sechium edule HOM05D003231 ORTHO05D003865 1.7e-06 60.1 127 33.1
Cpa.g.sc148.16 Carica papaya HOM05D003231 ORTHO05D003865 2.9e-06 59.3 207 27.5
ClCG05G017420 Citrullus lanatus HOM05D003231 ORTHO05D003865 2.9e-06 59.3 177 29.9
Prupe.1G462700 Prunus persica HOM05D003231 ORTHO05D003865 2.9e-06 59.3 155 32.3
CiPaw.07G214900 Carya illinoinensis HOM05D003231 ORTHO05D003865 3.8e-06 58.9 127 32.3
Gohir.D06G110100 Gossypium hirsutum HOM05D003231 ORTHO05D003865 3.8e-06 58.9 215 27.4
Psat5g025840 Pisum sativum HOM05D003231 ORTHO05D003865 3.8e-06 58.9 125 32.8
Pp3c2_6330 Physcomitrium patens HOM05D003231 ORTHO05D003865 4.9e-06 58.5 127 34.6
Pp3c2_6336 Physcomitrium patens HOM05D003231 ORTHO05D003865 4.9e-06 58.5 127 34.6
Phvul.009G100100 Phaseolus vulgaris HOM05D003231 ORTHO05D003865 6.4e-06 58.2 127 33.1
Potri.006G281400 Populus trichocarpa HOM05D003231 ORTHO05D003865 6.4e-06 58.2 184 28.8
FAN15G1275 Fragaria x ananassa HOM05D003231 ORTHO05D003865 8.4e-06 57.8 127 33.9
Gorai.010G125100 Gossypium raimondii HOM05D003231 ORTHO05D003865 8.4e-06 57.8 215 27.0
Manes.16G138400 Manihot esculenta HOM05D003231 ORTHO05D003865 8.4e-06 57.8 127 32.3


User provided reference genes

Program Settings