Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.2e-146 523.1 259 100.0
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.7e-92 343.2 224 75.0
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 1.1e-91 340.5 225 72.9
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 9.6e-91 337.4 214 74.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 2.1e-90 336.3 247 68.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 4.7e-90 335.1 214 74.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.1e-89 334.0 226 71.2
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 5.3e-89 331.6 233 70.0
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 9.0e-89 330.9 226 71.2
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 9.0e-89 330.9 234 67.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.2e-88 330.5 233 69.5
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.0e-88 329.7 214 73.8
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.0e-88 329.7 223 71.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 2.6e-88 329.3 214 71.5
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.4e-88 328.9 229 69.4
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.4e-88 328.9 214 71.5
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 3.4e-88 328.9 228 69.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 3.4e-88 328.9 198 76.8
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.4e-88 328.6 214 71.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.4e-88 328.6 214 71.0
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.4e-88 328.6 214 71.0
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.4e-88 328.6 219 72.1
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 5.8e-88 328.2 212 75.9
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 7.6e-88 327.8 214 70.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.6e-88 327.8 214 70.1
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.6e-88 327.8 233 69.1
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.6e-88 327.8 227 70.0
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.9e-88 327.4 227 69.2
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 9.9e-88 327.4 233 67.0
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.3e-87 327.0 214 70.1
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.3e-87 327.0 244 65.6
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 1.3e-87 327.0 228 68.4
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.7e-87 326.6 214 70.6
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.7e-87 326.6 254 66.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.2e-87 326.2 254 66.9
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.9e-87 325.9 232 68.1
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 3.8e-87 325.5 237 67.9
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 3.8e-87 325.5 227 69.2
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 4.9e-87 325.1 214 69.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 4.9e-87 325.1 214 71.5
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 8.4e-87 324.3 212 72.2
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.1e-86 323.9 214 70.1
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.9e-86 323.2 214 71.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.9e-86 323.2 244 65.2
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.9e-86 323.2 234 66.7
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.4e-86 322.8 226 68.6
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.4e-86 322.8 214 72.4
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 3.2e-86 322.4 220 71.4
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 3.2e-86 322.4 212 71.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.2e-86 322.0 244 64.3
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 4.2e-86 322.0 214 71.0
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 7.1e-86 321.2 229 68.6
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 9.3e-86 320.9 257 63.8
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 9.3e-86 320.9 214 68.7
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 9.3e-86 320.9 235 67.7
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-85 320.1 212 72.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.6e-85 320.1 236 66.1
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 2.1e-85 319.7 243 63.8
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 2.7e-85 319.3 225 68.9
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.7e-85 319.3 212 71.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.6e-85 318.5 255 62.4
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 4.6e-85 318.5 214 69.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 7.8e-85 317.8 234 67.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.0e-84 317.4 214 69.6
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.3e-84 317.0 249 63.1
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.3e-84 317.0 225 68.4
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.7e-84 316.6 214 69.6
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 3.0e-84 315.8 219 68.0
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 3.9e-84 315.5 222 68.9
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 5.1e-84 315.1 228 67.1
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 5.1e-84 315.1 216 68.5
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 5.1e-84 315.1 223 67.7
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 5.1e-84 315.1 248 65.3
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 5.1e-84 315.1 213 71.8
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 6.6e-84 314.7 251 64.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.1e-83 313.9 231 65.8
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.5e-83 313.5 241 63.1
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.9e-83 313.2 226 66.8
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.9e-83 313.2 228 66.7
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 4.3e-83 312.0 252 62.7
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 4.3e-83 312.0 248 63.7
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 4.3e-83 312.0 223 66.8
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 7.3e-83 311.2 247 63.2
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 9.6e-83 310.8 256 62.9
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.3e-82 310.5 244 61.9
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.1e-82 309.7 266 63.2
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.8e-82 309.3 224 67.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 8.1e-82 307.8 224 66.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-81 307.4 241 61.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.8e-81 306.6 225 65.8
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 4.0e-81 305.4 234 63.2
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 9.0e-81 304.3 225 65.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 3.4e-80 302.4 242 64.9
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 9.9e-80 300.8 195 71.3
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.3e-79 300.4 222 64.4
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 4.9e-79 298.5 210 70.5
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.2e-78 295.8 205 69.8
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 4.6e-77 292.0 304 51.3
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 2.3e-76 289.7 280 56.4
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.2e-71 273.1 222 62.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.9e-71 272.7 164 73.8
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.2e-69 267.3 167 76.0
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.6e-66 256.9 236 53.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 4.8e-66 255.4 167 71.3
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.6e-64 249.6 183 66.7
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.2e-63 246.5 218 53.2
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 8.8e-52 208.0 140 70.0
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.0e-51 206.8 230 49.6
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 5.9e-48 195.3 145 77.2
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.1e-46 191.0 101 84.2
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 3.3e-43 179.5 239 45.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.2e-40 171.0 123 67.5
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 5.9e-40 168.7 211 44.1
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.7e-35 152.1 213 41.3
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 1.7e-26 124.0 94 63.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 7.0e-25 118.6 86 67.4
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 7.0e-25 118.6 86 67.4
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.6e-24 117.5 90 66.7
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.5e-22 110.9 94 58.5
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.9e-22 110.5 62 77.4
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.9e-22 110.5 211 36.0
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 7.2e-22 108.6 116 53.4
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-19 100.1 79 64.6
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 9.8e-19 98.2 203 34.0
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.1e-17 94.7 84 56.0
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 7.0e-17 92.0 142 43.7
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 7.0e-17 92.0 142 43.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.6e-16 90.9 216 35.2
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.8e-12 77.4 54 66.7
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 2.3e-12 77.0 85 49.4
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 5.4e-09 65.9 54 59.3
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.5e-06 57.8 49 59.2
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 4.3e-06 56.2 31 87.1


User provided reference genes

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