Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 6.7e-36 153.3 68 100.0
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.0e-23 112.8 54 87.0
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.5e-22 108.2 54 83.3
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.2e-22 107.5 53 83.0
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.5e-22 107.1 47 95.7
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.2e-21 105.9 53 81.1
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 3.0e-20 101.3 54 79.6
Os02g0159850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.6e-19 98.2 54 77.8
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.4e-19 97.4 53 79.2
Os02g0657775 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.2e-12 73.9 34 88.2
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 3.7e-10 67.8 43 67.4
Os07g0593100 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.8e-10 67.4 38 81.6
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 8.3e-10 66.6 38 73.7
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.4e-09 65.1 39 71.8
Os02g0657850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 7.0e-09 63.5 34 79.4
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.1e-09 63.2 46 63.0
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 9.1e-09 63.2 45 60.0
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 1.2e-08 62.8 50 60.0
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-08 62.8 44 63.6
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.2e-08 62.8 44 63.6
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.6e-08 62.4 45 62.2
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-08 62.4 39 66.7
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-08 62.4 39 66.7
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-08 62.4 39 66.7
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 1.6e-08 62.4 35 74.3
Os08g0327550 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.6e-08 62.4 43 62.8
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.0e-08 62.0 36 75.0
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.7e-08 61.6 36 72.2
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.5e-08 61.2 36 69.4
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.9e-08 60.5 39 66.7
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.3e-07 58.5 36 69.4
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.0e-07 57.4 38 65.8
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 8.6e-07 56.6 43 62.8
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 8.6e-07 56.6 35 71.4
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 8.6e-07 56.6 45 55.6
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.1e-06 56.2 34 70.6
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-06 56.2 36 66.7
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.5e-06 55.8 38 63.2
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-06 55.5 38 55.3
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-06 55.5 38 63.2
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-06 55.5 38 60.5
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 4.2e-06 54.3 31 74.2


User provided reference genes

Program Settings