Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.4e-178 629.4 306 100.0
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 2.8e-158 562.0 304 89.8
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 3.7e-158 561.6 306 89.9
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 1.7e-118 429.9 306 66.7
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.7e-115 419.9 306 64.4
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 1.4e-112 410.2 307 63.5
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 8.9e-112 407.5 308 62.3
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 8.9e-112 407.5 308 62.3
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.5e-111 406.8 308 62.7
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.4e-111 405.6 308 62.3
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 3.4e-111 405.6 308 60.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 2.9e-110 402.5 305 60.0
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 3.7e-110 402.1 308 61.4
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 6.4e-110 401.4 308 62.0
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 1.1e-109 400.6 308 60.7
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.4e-109 400.2 306 60.8
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 2.4e-109 399.4 308 61.0
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.4e-109 399.4 308 61.7
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 3.2e-109 399.1 306 61.8
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 3.2e-109 399.1 308 61.7
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.2e-108 397.1 307 61.6
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.6e-108 396.7 308 60.7
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 2.7e-108 396.0 309 61.2
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 1.0e-107 394.0 308 60.1
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 3.0e-107 392.5 311 61.4
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 6.6e-107 391.3 305 61.3
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 1.5e-106 390.2 309 59.9
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.5e-106 390.2 308 60.4
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 2.5e-106 389.4 306 58.5
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 3.3e-106 389.0 305 61.0
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 3.3e-106 389.0 301 58.8
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 4.3e-106 388.7 307 60.9
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.6e-106 388.3 305 59.7
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.6e-106 388.3 305 59.7
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.2e-105 387.1 310 60.0
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.6e-105 386.7 307 60.9
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 1.6e-105 386.7 309 60.5
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 1.6e-105 386.7 307 60.3
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 2.1e-105 386.3 306 59.8
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 2.8e-105 386.0 306 59.2
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 2.8e-105 386.0 306 58.2
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 4.7e-105 385.2 294 62.6
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.7e-105 385.2 286 61.9
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 4.7e-105 385.2 309 59.2
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 8.1e-105 384.4 306 60.1
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 8.1e-105 384.4 308 57.8
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.1e-104 384.0 303 58.4
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.4e-104 383.6 306 59.8
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.8e-104 383.3 294 60.5
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 3.1e-104 382.5 302 59.6
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 3.1e-104 382.5 292 61.6
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 4.0e-104 382.1 305 59.3
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 4.0e-104 382.1 306 59.2
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 5.2e-104 381.7 305 58.4
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 5.2e-104 381.7 306 59.8
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 8.9e-104 380.9 308 60.7
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 8.9e-104 380.9 307 57.7
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 1.5e-103 380.2 307 57.3
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 2.0e-103 379.8 311 57.9
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 4.4e-103 378.6 300 57.7
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 7.5e-103 377.9 294 58.5
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 1.7e-102 376.7 309 57.9
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 2.9e-102 375.9 308 57.8
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.7e-102 375.6 306 56.5
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 4.9e-102 375.2 309 57.6
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 6.4e-102 374.8 308 59.7
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 8.3e-102 374.4 350 54.0
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.1e-101 374.0 307 57.3
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 3.2e-101 372.5 314 58.3
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 7.1e-101 371.3 288 60.1
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 9.2e-101 370.9 305 55.4
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 9.2e-101 370.9 306 56.9
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.2e-100 370.5 311 57.9
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 1.2e-100 370.5 306 56.5
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 1.2e-100 370.5 310 60.0
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 1.6e-100 370.2 311 57.6
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.6e-100 370.2 292 56.8
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 2.7e-100 369.4 304 59.2
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 3.5e-100 369.0 317 58.0
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 6.0e-100 368.2 311 56.9
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 1.0e-99 367.5 303 57.1
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 1.0e-99 367.5 306 56.5
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 1.3e-99 367.1 307 58.0
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 3.0e-99 365.9 306 56.2
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 3.9e-99 365.5 289 58.1
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 5.1e-99 365.2 303 57.1
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 5.1e-99 365.2 303 57.1
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 5.1e-99 365.2 308 57.5
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 6.6e-99 364.8 303 57.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 6.6e-99 364.8 303 57.8
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-98 364.0 303 57.1
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.1e-98 364.0 313 55.0
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 3.3e-98 362.5 307 54.7
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 3.3e-98 362.5 309 55.0
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 4.3e-98 362.1 306 55.9
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 4.3e-98 362.1 308 56.5
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 5.6e-98 361.7 304 58.2
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.2e-97 360.5 242 67.8
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 4.7e-97 358.6 307 55.0
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 8.1e-97 357.8 307 53.4
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.4e-96 357.1 278 59.7
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 1.4e-96 357.1 294 56.8
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.8e-96 356.7 305 55.1
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 6.8e-96 354.8 290 60.0
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 1.5e-95 353.6 309 54.0
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 5.8e-95 351.7 292 57.5
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 1.3e-94 350.5 313 55.6
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 4.9e-94 348.6 290 58.3
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 4.9e-94 348.6 287 56.1
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 5.4e-93 345.1 304 54.9
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 2.1e-92 343.2 296 54.4
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 7.8e-92 341.3 297 56.9
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 3.0e-91 339.3 283 55.8
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 6.6e-91 338.2 306 54.2
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 2.5e-90 336.3 307 54.1
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 3.6e-89 332.4 306 52.6
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 2.4e-88 329.7 282 56.4
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 9.3e-85 317.8 250 60.0
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 5.8e-79 298.5 298 49.7
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 2.9e-70 269.6 321 41.4
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 5.5e-69 265.4 292 47.9
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 5.1e-67 258.8 287 47.4
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.4e-64 250.8 292 45.2
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 6.3e-57 225.3 288 41.7
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.4e-27 127.9 115 52.2
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.4e-24 117.9 115 49.6
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.7e-17 94.4 173 33.5
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.7e-17 94.4 128 42.2
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 5.5e-13 79.3 246 28.5
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 2.0e-10 70.9 49 59.2


User provided reference genes

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